RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MDKP21741 143 aaPredicted RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 RPL12P30050 165 aaKnown RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 FCGR2CP31995 323 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ARRB1P49407 418 aaPredicted RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 FHITP49789 147 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 UCP2P55851 309 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 TAS2R31P59538 309 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 SMAD3P84022 425 aaKnown RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 RAB11BQ15907 218 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 C2orf76Q3KRA6 126 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 Q6ZVU0 165 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 C12orf76Q8N812 135 aaPredicted RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 PRAP1Q96NZ9 151 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 TECTBQ96PL2 329 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 HIST1H2AAQ96QV6 131 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 RARRES2Q99969 163 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 MIEN1Q9BRT3 115 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 PIMREGQ9BSJ6 248 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 KIAA1671Q9BY89 1806 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 TRBV5-4A0A0C4DH59 114 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 PPP5D1E7EU14 171 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 H3BSH0 61 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 FBXO45P0C2W1 286 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 KLK2P20151 261 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 TACR2P21452 398 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 ID1P41134 155 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 SELENOVP59797 346 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 GAS6Q14393 721 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 RTL6Q6ICC9 239 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 MDGA2Q7Z553 956 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 LINC00346Q8IVM7 164 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 OR4X1Q8NH49 305 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 OR5AK2Q8NH90 309 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 ZNF417Q8TAU3 575 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 FGF13Q92913 245 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 TSLPQ969D9 159 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 FAM3DQ96BQ1 224 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 C16orf58Q96GQ5 468 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 SUSD3Q96L08 255 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 ZMAT3Q9HA38 289 aaKnown RBP7.07□□□□□ -1.28
VPS11-209ENST00000622309 CXXC1Q9P0U4 656 aaPredicted RBP7.07□□□□□ -1.28
VPS11-209ENST00000622309 NAGKQ9UJ70 344 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 STRAPQ9Y3F4 350 aaKnown RBP7.07□□□□□ -1.28
VPS11-209ENST00000622309 A6NIZ1 184 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 CLDN34H7C241 214 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 PPBPP02775 128 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 LYL1P12980 280 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 BCKDHBP21953 392 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 SLC2A5P22732 501 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 COMPP49747 757 aaPredicted RBP7.07□□□□□ -1.28
VPS11-209ENST00000622309 ATP5J2P56134 94 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 NHLH1Q02575 133 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 SLC25A26Q70HW3 274 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 FAM220AQ7Z4H9 259 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 P4HA3Q7Z4N8 544 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 OR51A7Q8NH64 312 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 FAM213BQ8TBF2 198 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 CABLES2Q9BTV7 478 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 KCNK15Q9H427 330 aa7.07□□□□□ -1.28
VPS11-209ENST00000622309 SIRT3Q9NTG7 399 aaPredicted RBP7.07□□□□□ -1.28
VPS11-209ENST00000622309 LOC100289279A0A1B0GTE1 492 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 MED19A0JLT2 244 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR4C45A6NMZ5 311 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 GRM6O15303 877 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 LEFTY1O75610 366 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 KAT7O95251 611 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 UMODP07911 640 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 RHOCP08134 193 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 FRKP42685 505 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 RHOAP61586 193 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 THSD4Q6ZMP0 1018 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 SLCO4C1Q6ZQN7 724 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 CHST9Q7L1S5 443 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 TMPRSS7Q7RTY8 843 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR2L13Q8N349 312 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 SLC26A10Q8NG04 563 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR4C5Q8NGB2 326 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR14L1PQ8NHC6 308 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ANKRD9Q96BM1 317 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 SLC35E1Q96K37 410 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 C2orf50Q96LR7 162 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ARHGDIGQ99819 225 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 GINS3Q9BRX5 216 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ZNF106Q9H2Y7 1883 aaKnown RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 RAB18Q9NP72 206 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 B3GAT1Q9P2W7 334 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 RBFOX3A6NFN3 312 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ANKUB1A6NFN9 424 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 M0QZQ0 153 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ADAM20O43506 726 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 C1QL1O75973 258 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 KLF8O95600 359 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 F11P03951 625 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 CATP04040 527 aaKnown RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 SEC11BP0C7V7 166 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 MMP16P51512 607 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ELLP55199 621 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 TMEM33P57088 247 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 NANOS3P60323 173 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms