RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 XKRXQ6PP77 449 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 NHLRC1Q6VVB1 395 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 C6orf201Q7Z4U5 140 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 LRRC28Q86X40 367 aaPredicted RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 CASTOR1Q8WTX7 329 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 SPTSSAQ969W0 71 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 UPRTQ96BW1 309 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 WDR89Q96FK6 387 aaPredicted RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 SEC22CQ9BRL7 303 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 POFUT1Q9H488 388 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 PNRC2Q9NPJ4 139 aaKnown RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 MRPS28Q9Y2Q9 187 aaKnown RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 A0A1B0GTI1 187 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 A0A1W2PNV4 684 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 A6NLC8 198 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 FAM25EA8MYX2 175 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ZNF17P17021 662 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 STOMP27105 288 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 MAPK3P27361 379 aaPredicted RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 TAS2R20P59543 309 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 PLP2Q04941 152 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ZNF169Q14929 603 aaPredicted RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 PIGYQ3MUY2 71 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 CDNFQ49AH0 187 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 C22orf34Q6ZV56 151 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 METTL17Q9H7H0 456 aaPredicted RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 EVA1AQ9H8M9 152 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 TMEM138Q9NPI0 162 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ADAM30Q9UKF2 790 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 B3GNT3Q9Y2A9 372 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 PDCD5O14737 125 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 HS3ST1O14792 307 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 OR7C1O76099 320 aaPredicted RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 HLA-DQB1P01920 261 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 PMP2P02689 132 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 DDOSTP39656 456 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 NPBWR2P48146 333 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 PSMA6P60900 246 aaKnown RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 EIF2S3LQ2VIR3 472 aaKnown RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 Q6ZTK2 550 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 SLC25A26Q70HW3 274 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 PGAP1Q75T13 922 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ELMOD2Q8IZ81 293 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 OR2J1Q9GZK6 312 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 TINAGL1Q9GZM7 467 aaPredicted RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 CYSLTR2Q9NS75 346 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 STEAP1Q9UHE8 339 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 TAF4O00268 1085 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ARPC1BO15143 372 aaKnown RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 AKR7A2O43488 359 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 CSTBP04080 98 aaKnown RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 ALDOBP05062 364 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ZNF12P17014 697 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 HAAOP46952 286 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 RIN1Q13671 783 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 KISS1Q15726 138 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 TBRG1Q3YBR2 411 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 RNLSQ5VYX0 342 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 ZNF826PQ6ZT77 177 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 MRPL21Q7Z2W9 205 aaKnown RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 SLC43A2Q8N370 569 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 RBMXL3Q8N7X1 1067 aaKnown RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 FBXW5Q969U6 566 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 OR14J1Q9UGF5 321 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
VPS11-208ENST00000621676 PLEKHA6Q9Y2H5 1048 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
VPS11-208ENST00000621676 USP24Q9UPU5 2620 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 hCG_1807616A0A1W2PRN6 198 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 F8VVB4 439 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 F8VWA3 439 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 INMT-MINDY4F8WBC2 141 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 SSNA1O43805 119 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 CYTIPO60759 359 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 BLVRBP30043 206 aaPredicted RBP9.15□□□□□ -0.94
VPS11-208ENST00000621676 MRPS15P82914 257 aaKnown RBP9.15□□□□□ -0.94
VPS11-208ENST00000621676 ACSM1Q08AH1 577 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 LTC4SQ16873 150 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 TEX30Q5JUR7 227 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 GFRALQ6UXV0 394 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 ZNF782Q6ZMW2 699 aaPredicted RBP9.15□□□□□ -0.94
VPS11-208ENST00000621676 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 OR51S1Q8NGJ8 323 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 KCNJ15Q99712 375 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 OR2B2Q9GZK3 357 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 CHST6Q9GZX3 395 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 ISYNA1Q9NPH2 558 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 DIABLOQ9NR28 239 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 RRP8O43159 456 aaKnown RBP9.15□□□□□ -0.94
VPS11-208ENST00000621676 IL18BPO95998 194 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 VSIG8P0DPA2 414 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 AGTR1P30556 359 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 HOXC12P31275 282 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 RCVRNP35243 200 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 MMP15P51511 669 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 MMP16P51512 607 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 AP2S1P53680 142 aaPredicted RBP9.15□□□□□ -0.94
VPS11-208ENST00000621676 BDH1Q02338 343 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 389.9 ms