RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GUSBP08236 651 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 IGFBP1P08833 259 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 RAB7AP51149 207 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 EXOSC2Q13868 293 aaKnown RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 AANATQ16613 207 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 RHOUQ7L0Q8 258 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 BAP18Q8IXM2 172 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 NPEPL1Q8NDH3 523 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 ZNF680Q8NEM1 530 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 OR1N1Q8NGS0 311 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 EMC6Q9BV81 110 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 CYSLTR2Q9NS75 346 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 ANK1P16157 1881 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 LMO7DNF2Z398 122 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 PPP1CAP62136 330 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 SNRPNP63162 240 aaKnown RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 COL9A2Q14055 689 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 IL11RAQ14626 422 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 ZNF425Q6IV72 752 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 CORO6Q6QEF8 472 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 TEX261Q6UWH6 196 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 RSPO2Q6UXX9 243 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 CYHR1Q6ZMK1 362 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 TMEM179BQ7Z7N9 219 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 TEX19Q8NA77 164 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 PHYHIPLQ96FC7 376 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 FAM173AQ9BQD7 235 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 BARX1Q9HBU1 254 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 U3KQ87 197 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 CLEC18AA5D8T8 446 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 LRRC3CA6NJW4 275 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 PRRT4C9JH25 899 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 HPP00738 406 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 SMIM17P0DL12 118 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 OR5H8P0DN80 308 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 FGF9P31371 208 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 FXNQ16595 210 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 NUFIP2Q7Z417 695 aaKnown RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 CLEC18CQ8NCF0 446 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 TMED6Q8WW62 240 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 ANKRD10Q9NXR5 420 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 PPIL1Q9Y3C6 166 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 TMED3Q9Y3Q3 217 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 KCNE1BA0A087WTH5 132 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 IGHV3-20A0A0C4DH32 117 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 UBE2L5PA0A1B0GUS4 154 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 A0A1W2PPC4 97 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 CD3DP04234 171 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 CD37P11049 281 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 ST6GAL1P15907 406 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 RGS7BPQ6MZT1 257 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 PAQR6Q6TCH4 344 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 TMEM123Q8N131 208 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 CLRN3Q8NCR9 226 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 WDR61Q9GZS3 305 aaKnown RBP4.12□□□□□ -1.75
CHD9-221ENST00000615216 ZNF385DQ9H6B1 395 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 IL20Q9NYY1 176 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 A4GNTQ9UNA3 340 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 GOLT1BQ9Y3E0 138 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 LRP12Q9Y561 859 aa4.12□□□□□ -1.75
CHD9-221ENST00000615216 IGLV3-16A0A075B6K0 115 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 TRIM77I1YAP6 450 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 OR7C2O60412 319 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 FGF2P09038 288 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 SFTA3P0C7M3 94 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 HAAOP46952 286 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 RPS16P62249 146 aaKnown RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 C11orf87Q6NUJ2 197 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 DRAM2Q6UX65 266 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 TDHQ8IZJ6 230 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 FBXW5Q969U6 566 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 WDR34Q96EX3 536 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 FZD6O60353 706 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 RPL13AP40429 203 aaKnown RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 FOXB2Q5VYV0 432 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 RTN4RL1Q86UN2 441 aaPredicted RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 ETFBKMTQ8IXQ9 262 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 KISS1RQ969F8 398 aaPredicted RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 ZC3HAV1LQ96H79 300 aaKnown RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 TAAR9Q96RI9 348 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 RAB40CQ96S21 281 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 EDEM2Q9BV94 578 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 POMT1Q9Y6A1 747 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 TMEM272A0A1B0GTI8 110 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 CRYAAP02489 173 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 P2RX3P56373 397 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 OR5I1Q13606 314 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 TMEM240Q5SV17 173 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 CST9Q5W186 159 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 MARCH1Q8TCQ1 289 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 ZNF764Q96H86 408 aaPredicted RBP4.11□□□□□ -1.75
CHD9-221ENST00000615216 TMEM9BQ9NQ34 198 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 CLCF1Q9UBD9 225 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 RALGAPA1Q6GYQ0 2036 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 CCDC187A0A096LP49 1063 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 NDUFB6O95139 128 aa4.11□□□□□ -1.75
CHD9-221ENST00000615216 GP1BAP07359 652 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms