RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CLVS2Q5SYC1 327 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 UNQ9370/PRO34162Q6UXP9 181 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 GPR141Q7Z602 305 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 DTX2Q86UW9 622 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 PARP16Q8N5Y8 322 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 OR13F1Q8NGS4 319 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 PHYHIPQ92561 330 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 ABCB9Q9NP78 766 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 RHBDD3Q9Y3P4 386 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 MPC1Q9Y5U8 109 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 PMF1-BGLAPU3KQ54 211 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 UTP20O75691 2785 aaKnown RBP12.56□□□□□ -0.4
CD48-203ENST00000613788 TRDV1A0A1B0GX56 115 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 A6NIN4 97 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 GMDSO60547 372 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 LMX1BO60663 402 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 SC5DO75845 299 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 NRASP01111 189 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 CA6P23280 308 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 TGFBR2P37173 567 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 MAGEB1P43366 347 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 ZNF81P51508 661 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 FABP5Q01469 135 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 TIMM50Q3ZCQ8 353 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 TMEM42Q69YG0 159 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 CD200R1LQ6Q8B3 271 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 CEACAM19Q7Z692 300 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 TMIGD2Q96BF3 282 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 YIPF6Q96EC8 236 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 ADAT3Q96EY9 351 aaPredicted RBP12.55□□□□□ -0.4
CD48-203ENST00000613788 HIST1H2AAQ96QV6 131 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 DIRC2Q96SL1 478 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 PAPOLGQ9BWT3 736 aaKnown RBP12.55□□□□□ -0.4
CD48-203ENST00000613788 DYNLRB1Q9NP97 96 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 ZDHHC8Q9ULC8 765 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 STUB1Q9UNE7 303 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 SSR3Q9UNL2 185 aa12.55□□□□□ -0.4
CD48-203ENST00000613788 ABCA4P78363 2273 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.54□□□□□ -0.4
CD48-203ENST00000613788 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 ANXA2P2A6NMY6 339 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 ZNF850A8MQ14 1090 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 GABRPO00591 440 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 LILRA1O75019 489 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 SOD3P08294 240 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 PRDX4Q13162 271 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 HIST2H2BCQ6DN03 193 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 TMEM91Q6ZNR0 172 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 UTS2BQ765I0 119 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 TECTBQ96PL2 329 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 DERL3Q96Q80 235 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 TRAF4Q9BUZ4 470 aaPredicted RBP12.54□□□□□ -0.4
CD48-203ENST00000613788 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 MSL2Q9HCI7 577 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 CKLFQ9UBR5 152 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 EDARQ9UNE0 448 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 LAMP3Q9UQV4 416 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 GSTK1Q9Y2Q3 226 aa12.54□□□□□ -0.4
CD48-203ENST00000613788 TRBV5-7A0A0A0MS05 114 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 A0A1B0GWJ7 208 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 ARL6IP5O75915 188 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 CD8AP01732 235 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 TNFSF4P23510 183 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 CRYBB2P43320 205 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 MZT1Q08AG7 82 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 INSL4Q14641 139 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 OR8G1Q15617 311 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 C11orf71Q6IPW1 123 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 Q6ZR03 302 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 MOB3CQ70IA8 216 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 ZDHHC23Q8IYP9 409 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 OR8S1Q8NH09 359 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 EXOSC4Q9NPD3 245 aaKnown RBP12.53□□□□□ -0.4
CD48-203ENST00000613788 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 SLC7A11Q9UPY5 501 aa12.53□□□□□ -0.4
CD48-203ENST00000613788 A0A1W2PPK0 400 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 ZSCAN5BA6NJL1 495 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 C17orf100A8MU93 164 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 SPRY3O43610 288 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 ADH4P08319 380 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 UCHL1P09936 223 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.4
CD48-203ENST00000613788 NAT2P11245 290 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 GADD45AP24522 165 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.4
CD48-203ENST00000613788 PPOXP50336 477 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 PPP3R1P63098 170 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 CNN3Q15417 329 aaKnown RBP12.52□□□□□ -0.4
CD48-203ENST00000613788 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 PLCXD3Q63HM9 321 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 OR2Z1Q8NG97 314 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms