RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 EFCAB10A6NFE3 127 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 PPIHO43447 177 aaKnown RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 MTRF1O75570 445 aaKnown RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 CST4P01036 141 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 HTR1AP08908 422 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 PIPP12273 146 aaPredicted RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 ATP6V1B1P15313 513 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 USF1P22415 310 aaPredicted RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 CD200P41217 278 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 KIR3DL2P43630 455 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 NANOS3P60323 173 aaKnown RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 LOXL1Q08397 574 aaPredicted RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 FDX2Q6P4F2 183 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 FTMTQ8N4E7 242 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 SPERTQ8NA61 448 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 PLPP7Q8NBV4 271 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 SEMA6DQ8NFY4 1073 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 PIGCQ92535 297 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 PAPOLGQ9BWT3 736 aaKnown RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 CNOT2Q9NZN8 540 aaKnown RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 FRRS1LQ9P0K9 344 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 CLEC2DQ9UHP7 191 aa14.04□□□□□ -0.16
IRF1-211ENST00000613424 EXOSC1Q9Y3B2 195 aaKnown RBP14.04□□□□□ -0.16
IRF1-211ENST00000613424 IGHV4-61A0A0C4DH41 118 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 LOC100289279A0A1B0GTE1 492 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 ZNF850A8MQ14 1090 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 DHRS3O75911 302 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 GNALP38405 381 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 PMELP40967 661 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 CSNK2BP67870 215 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 RIPPLY1Q0D2K3 151 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 Q6ZSR3 168 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 DOK3Q7L591 496 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 KRT74Q7RTS7 529 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 RDH10Q8IZV5 341 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 OR14K1Q8NGZ2 314 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 OR8S1Q8NH09 359 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 ZNF420Q8TAQ5 688 aaPredicted RBP14.03□□□□□ -0.16
IRF1-211ENST00000613424 TMEM106BQ9NUM4 274 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 DCAF16Q9NXF7 216 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 RAB26Q9ULW5 256 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 PIGLQ9Y2B2 252 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 CAB39Q9Y376 341 aaPredicted RBP14.03□□□□□ -0.16
IRF1-211ENST00000613424 MPC1Q9Y5U8 109 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 V9GYS6 101 aa14.03□□□□□ -0.16
IRF1-211ENST00000613424 CR1P17927 2039 aa14.02□□□□□ -0.16
IRF1-211ENST00000613424 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.02□□□□□ -0.17
IRF1-211ENST00000613424 ZNF816-ZNF321PA0A0X1KG74 233 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 CLDN25C9JDP6 229 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 E9PI62 339 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 H3BSH0 61 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 PTBP3O95758 552 aaKnown RBP14.02□□□□□ -0.17
IRF1-211ENST00000613424 MYL12AP19105 171 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 CCL1P22362 96 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 GATA4P43694 442 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 CCR9P51686 369 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 GBX2P52951 348 aaPredicted RBP14.02□□□□□ -0.17
IRF1-211ENST00000613424 SLC3A1Q07837 685 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 MZT1Q08AG7 82 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 PRDX4Q13162 271 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 ALKBH1Q13686 389 aaKnown RBP14.02□□□□□ -0.17
IRF1-211ENST00000613424 MPPED2Q15777 294 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 ZBTB37Q5TC79 503 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 OR2G6Q5TZ20 316 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 PRAMEF6Q5VXH4 476 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 AHSA2Q719I0 299 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 MOGAT3Q86VF5 341 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 STX19Q8N4C7 294 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 CNBD2Q96M20 576 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 SMR3AQ99954 134 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 FKBP14Q9NWM8 211 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 C14orf119Q9NWQ9 140 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 CHCHD3Q9NX63 227 aaKnown RBP14.02□□□□□ -0.17
IRF1-211ENST00000613424 TANC2Q9HCD6 1990 aa14.02□□□□□ -0.17
IRF1-211ENST00000613424 A0A1B0GVI7 797 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 A6NIN4 97 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 PTGES3LE9PB15 166 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 IFNL4K9M1U5 179 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 SLC1A7O00341 560 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 WNT9BO14905 357 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 SYT7O43581 403 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 GRPP07492 148 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 UBCP0CG48 685 aaKnown RBP14.01□□□□□ -0.17
IRF1-211ENST00000613424 FAHP16930 419 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 C21orf33P30042 268 aaPredicted RBP14.01□□□□□ -0.17
IRF1-211ENST00000613424 MRPL28Q13084 256 aaKnown RBP14.01□□□□□ -0.17
IRF1-211ENST00000613424 MED21Q13503 144 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 AVPI1Q5T686 147 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 TMEM244Q5VVB8 128 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 TMPRSS11AQ6ZMR5 421 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 LURAP1LQ8IV03 231 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 ZDHHC23Q8IYP9 409 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 KLHL36Q8N4N3 616 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 RAB1CQ92928 201 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 ERGIC1Q969X5 290 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 ITPKCQ96DU7 683 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 ZNF184Q99676 751 aaPredicted RBP14.01□□□□□ -0.17
IRF1-211ENST00000613424 UFSP2Q9NUQ7 469 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 SCN3BQ9NY72 215 aa14.01□□□□□ -0.17
IRF1-211ENST00000613424 ENPP5Q9UJA9 477 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms