RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 CLRN3Q8NCR9 226 aa12.4□□□□□ -0.43
MUC1-223ENST00000611571 KCNJ15Q99712 375 aa12.4□□□□□ -0.43
MUC1-223ENST00000611571 YBX2Q9Y2T7 364 aaKnown RBP12.4□□□□□ -0.43
MUC1-223ENST00000611571 LCTP09848 1927 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 CXorf51AA0A1B0GTR3 108 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 MPC2O95563 127 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 DAOP14920 347 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 ENPP1P22413 925 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 OR3A4PP47883 348 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 SLC25A1P53007 311 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 HYAL1Q12794 435 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 TSPO2Q5TGU0 170 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 PLK3Q9H4B4 646 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 GPR160Q9UJ42 338 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 ELF5Q9UKW6 265 aaPredicted RBP12.39□□□□□ -0.43
MUC1-223ENST00000611571 MMP24Q9Y5R2 645 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
MUC1-223ENST00000611571 WDSUB1Q8N9V3 476 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 TMEM229BQ8NBD8 167 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 C10orf90Q96M02 699 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
MUC1-223ENST00000611571 NECAP2Q9NVZ3 263 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 SSSCA1O60232 199 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 HLA-HP01893 362 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 GRPP07492 148 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 NGFRP08138 427 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 MGAT2Q10469 447 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 NAA40Q86UY6 237 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 PLPPR2Q96GM1 343 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
MUC1-223ENST00000611571 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 HAO2Q9NYQ3 351 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 DNAJB11Q9UBS4 358 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
MUC1-223ENST00000611571 MED13LQ71F56 2210 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 FTCDNL1E5RQL4 147 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 SOCS1O15524 211 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 EPPINO95925 133 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 HPNP05981 417 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 CD37P11049 281 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 OR1N1Q8NGS0 311 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 NIPSNAP3BQ9BS92 247 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 GNG13Q9P2W3 67 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 PTP4A3O75365 173 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 ZP3P21754 424 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 EIF1P41567 113 aaKnown RBP12.38□□□□□ -0.43
MUC1-223ENST00000611571 ADIRFQ15847 76 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 SSX2Q16385 188 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 LSMEM1Q8N8F7 131 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 OR2I1PQ8NGU4 316 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 PCDHGA9Q9Y5G4 932 aaKnown RBP12.38□□□□□ -0.43
MUC1-223ENST00000611571 NOTCH3Q9UM47 2321 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 THY1P04216 161 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 H2AFB1P0C5Y9 115 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 VSIG10L2P0DP72 767 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 RRADP55042 308 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 GRB2P62993 217 aaKnown RBP12.38□□□□□ -0.43
MUC1-223ENST00000611571 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
MUC1-223ENST00000611571 HIST2H3AQ71DI3 136 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 NECAP1Q8NC96 275 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 NAT6Q93015 286 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 REEP6Q96HR9 211 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 CHD5Q8TDI0 1954 aa12.38□□□□□ -0.43
MUC1-223ENST00000611571 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 PIN1P1O15428 100 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 NME1P15531 152 aaKnown RBP12.37□□□□□ -0.43
MUC1-223ENST00000611571 NQO2P16083 231 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 MLF1P58340 268 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 ZNF141Q15928 474 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 C2orf50Q96LR7 162 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 LMO7DNF2Z398 122 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 SOX15O60248 233 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 JTBO76095 146 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 SCAF4O95104 1147 aaKnown RBP12.37□□□□□ -0.43
MUC1-223ENST00000611571 KISS1Q15726 138 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 ADGRG3Q86Y34 549 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 PGLYRP3Q96LB9 341 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 TUBG2Q9NRH3 451 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 PCNX1Q96RV3 2341 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 EIF1BO60739 113 aaKnown RBP12.37□□□□□ -0.43
MUC1-223ENST00000611571 FREM3P0C091 2139 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 KIR2DL1P43626 348 aaPredicted RBP12.37□□□□□ -0.43
MUC1-223ENST00000611571 GABRA2P47869 451 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 PCBD1P61457 104 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
MUC1-223ENST00000611571 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
MUC1-223ENST00000611571 ATG4DQ86TL0 474 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms