RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 DUX4L2P0CJ85 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4L3P0CJ86 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4L4P0CJ87 422 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4L5P0CJ88 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4L6P0CJ89 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4L7P0CJ90 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 RAP2AP10114 183 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 AMY2BP19961 511 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 CFL1P23528 166 aaKnown RBP6.29□□□□□ -1.4
CUX1-219ENST00000606749 OPRL1P41146 370 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TGM4P49221 684 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 CSNK2BP67870 215 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 ELF3P78545 371 aaPredicted RBP6.29□□□□□ -1.4
CUX1-219ENST00000606749 RELBQ01201 579 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 SRSF4Q08170 494 aaKnown RBP6.29□□□□□ -1.4
CUX1-219ENST00000606749 GK3PQ14409 553 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 MICBQ29980 383 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4L9Q6RFH8 374 aaPredicted RBP6.29□□□□□ -1.4
CUX1-219ENST00000606749 TREML4Q6UXN2 200 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 WDR82Q6UXN9 313 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TMEM179BQ7Z7N9 219 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 FGFRL1Q8N441 504 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 GALNT4Q8N4A0 578 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TMEM86BQ8N661 226 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 IQCF1Q8N6M8 205 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 KIR3DL3Q8N743 410 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 LY6G5BQ8NDX9 201 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 OR4F5Q8NH21 305 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TEX47Q8TBZ9 253 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TBC1D15Q8TC07 691 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 GIPC3Q8TF64 312 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 LRRC29Q8WV35 223 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 ST8SIA4Q92187 359 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 LHX4Q969G2 390 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 OTULINQ96BN8 352 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 SEH1LQ96EE3 360 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 CCL13Q99616 98 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 CHID1Q9BWS9 393 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TLNRD1Q9H1K6 362 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 OR51V1Q9H2C8 321 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 BEX1Q9HBH7 125 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 BRD7Q9NPI1 651 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 ACOXLQ9NUZ1 547 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DNAJC27Q9NZQ0 273 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 DUX4Q9UBX2 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
CUX1-219ENST00000606749 POMT1Q9Y6A1 747 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 A0A0U1RQK1 487 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 ARRDC5A6NEK1 342 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 ZNF850A8MQ14 1090 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 H3BN98 237 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 CDIPTO14735 213 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 NDUFA7O95182 113 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 KNG1P01042 644 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 H2BFMP0C1H6 154 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 PAICSP22234 425 aaKnown RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 CALB2P22676 271 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 ACKR3P25106 362 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 POU1F1P28069 291 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 GNALP38405 381 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 NAA10P41227 235 aaPredicted RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 IER3P46695 156 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 RAG2P55895 527 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 CDK5Q00535 292 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 IL5RAQ01344 420 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 GINS1Q14691 196 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 GFOD2Q3B7J2 385 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 CDONQ4KMG0 1287 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 FAM76BQ5HYJ3 339 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 WDR38Q5JTN6 314 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 ATPAF1Q5TC12 328 aaPredicted RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 OLFML2AQ68BL7 652 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 PLBD1Q6P4A8 553 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 SLC36A1Q7Z2H8 476 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 PDZD9Q8IXQ8 264 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 ADGRG5Q8IZF4 528 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 CSNK2A3Q8NEV1 391 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 OR5T2Q8NGG2 359 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 OTOSQ8NHW6 89 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 THEM6Q8WUY1 208 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 CANT1Q8WVQ1 401 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 SSMEM1Q8WWF3 244 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 C12orf43Q96C57 262 aaKnown RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 ITPKCQ96DU7 683 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 ASB9Q96DX5 294 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 PGAM5Q96HS1 289 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 CLPTM1LQ96KA5 538 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 LYZL4Q96KX0 146 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 LRGUKQ96M69 825 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 DMRTB1Q96MA1 342 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 PAPOLGQ9BWT3 736 aaKnown RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 RGCCQ9H4X1 137 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 HAO2Q9NYQ3 351 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 TAS2R1Q9NYW7 299 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 PDP1Q9P0J1 537 aaPredicted RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 PRPF19Q9UMS4 504 aaKnown RBP6.28□□□□□ -1.4
CUX1-219ENST00000606749 MPC1Q9Y5U8 109 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 KPTNQ9Y664 436 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms