RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PAFAH1B3Q15102 231 aaKnown RBP7.9□□□□□ -1.14
COMMD3-215ENST00000602574 RGNQ15493 299 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 RNASE12Q5GAN4 147 aaKnown RBP7.9□□□□□ -1.14
COMMD3-215ENST00000602574 ZNF343Q6P1L6 599 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 TSEN54Q7Z6J9 526 aaKnown RBP7.9□□□□□ -1.14
COMMD3-215ENST00000602574 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
COMMD3-215ENST00000602574 OR8G5Q8NG78 346 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 OR10X1Q8NGY0 326 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 GNRHR2Q96P88 292 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 PSMG3Q9BT73 122 aaPredicted RBP7.9□□□□□ -1.14
COMMD3-215ENST00000602574 AHSPQ9NZD4 102 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 FRRS1LQ9P0K9 344 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 B3GALT1Q9Y5Z6 326 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 MYO18AQ92614 2054 aaKnown RBP7.9□□□□□ -1.14
COMMD3-215ENST00000602574 LOC285556D6RIA3 1793 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 CLDN34H7C241 214 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 HRKO00198 91 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 PIRO00625 290 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF354AO60765 605 aaPredicted RBP7.9□□□□□ -1.15
COMMD3-215ENST00000602574 OR4Q2P0C623 313 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 GNB3P16520 340 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 TLE3Q04726 772 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 OR7A5Q15622 319 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 WDR74Q6RFH5 385 aaPredicted RBP7.9□□□□□ -1.15
COMMD3-215ENST00000602574 COX15Q7KZN9 410 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 NEGR1Q7Z3B1 354 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF101Q8IZC7 436 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF567Q8N184 647 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 NECAP1Q8NC96 275 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 TVP23CQ96ET8 276 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF607Q96SK3 696 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 GABRG3Q99928 467 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 TBL1YQ9BQ87 522 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 CTDSP1Q9GZU7 261 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 MOB1AQ9H8S9 216 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 TBC1D17Q9HA65 648 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 POPDC3Q9HBV1 291 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM9BQ9NQ34 198 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 SLC7A10Q9NS82 523 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 MTCH1Q9NZJ7 389 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 PTGFRNQ9P2B2 879 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 MMP17Q9ULZ9 603 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 SIGLEC7Q9Y286 467 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 STRAPQ9Y3F4 350 aaKnown RBP7.9□□□□□ -1.15
COMMD3-215ENST00000602574 ATP23Q9Y6H3 246 aa7.9□□□□□ -1.15
COMMD3-215ENST00000602574 TDRD15B5MCY1 1934 aaKnown RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 DDTLA6NHG4 134 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 H3BQ15 152 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 K7EQM0 130 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 GAPDHSO14556 408 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SIVA1O15304 175 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 IGHG4P01861 327 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CTSLP07711 333 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 RAB40ALP0C0E4 278 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 DUSP1P28562 367 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ATP1B3P54709 279 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 PIGPP57054 158 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CYCSP99999 105 aaKnown RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 PNRC1Q12796 327 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ZP4Q12836 540 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 C2orf27AQ580R0 203 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SYT14P1Q58G82 188 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 NCBP2-AS2Q69YL0 99 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 LINC00696Q6ZRV3 163 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ATG4DQ86TL0 474 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM130Q8N3G9 435 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ZSCAN4Q8NAM6 433 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 OR2T27Q8NH04 317 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 OR5K2Q8NHB8 316 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CCDC74AQ96AQ1 378 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF582Q96NG8 517 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 MS4A10Q96PG2 267 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 UCN2Q96RP3 112 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 LINC00470Q9BZP3 86 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CIPCQ9C0C6 399 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 A4GALTQ9NPC4 353 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM106BQ9NUM4 274 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SCML2Q9UQR0 700 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SLC17A4Q9Y2C5 497 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 MSRB2Q9Y3D2 182 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF236Q9UL36 1845 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 RALGAPA2Q2PPJ7 1873 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 NYNRINQ9P2P1 1898 aaKnown RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CHD3Q12873 2000 aaKnown RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 A6NIN4 97 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 G3V3Y1 287 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 MSTNO14793 375 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 RAMP1O60894 148 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 LRP3O75074 770 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 OPN1SWP03999 348 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CSN2P05814 226 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 RPS4Y1P22090 263 aaKnown RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 F2RP25116 425 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 OR1D2P34982 312 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 P2RX1P51575 399 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ATP5J2P56134 94 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 RPL32P62910 135 aaKnown RBP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 PAFAH1B2P68402 229 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 FOXF1Q12946 379 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 MEP1BQ16820 701 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms