RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 AADACL4Q5VUY2 407 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 C1orf229Q6ZS94 237 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 BPIFB2Q8N4F0 458 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 DEFB108BQ8NET1 73 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 OR8B12Q8NGG6 310 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 OR8B4Q96RC9 309 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 TMEM269A0A1B0GVZ9 245 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 OOEPA6NGQ2 149 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 TMEM210A6NLX4 147 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 EBAG9O00559 213 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF205O95201 554 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 AVPP01185 164 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 FSHBP01225 129 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 GRPP07492 148 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 ADRA2CP18825 462 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 MAP2K3P46734 347 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 EFNB1P98172 346 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 HNRNPA0Q13151 305 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 TMED1Q13445 227 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 C11orf91Q3C1V1 193 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 GALNT4Q8N4A0 578 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 OR8J1Q8NGP2 316 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 FAM81AQ8TBF8 368 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 DVL3Q92997 716 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 C19orf24Q9BVV8 132 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 CLN6Q9NWW5 311 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF319Q9P2F9 582 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 WARS2Q9UGM6 360 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 OPN4Q9UHM6 478 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 IKZF2Q9UKS7 526 aa14.83□□□□□ -0.04
SHKBP1-204ENST00000594862 IGHV2-70DA0A0C4DH43 119 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF670-ZNF695F2Z2N8 137 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 TRAPPC2LH3BP13 241 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 PSMB10P40306 273 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 EGR3Q06889 387 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 ZBTB37Q5TC79 503 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 CD276Q5ZPR3 534 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 OR1M1Q8NGA1 313 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 RAB40AQ8WXH6 277 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 RFKQ969G6 155 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 ITPKCQ96DU7 683 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 SEMA6AQ9H2E6 1030 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 RIBC2Q9H4K1 309 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 MMP26Q9NRE1 261 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 FAM206AQ9NX38 181 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 ERVK-18Q9QC07 812 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 NUFIP1Q9UHK0 495 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 RHBDD3Q9Y3P4 386 aa14.82□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF816-ZNF321PA0A0X1KG74 233 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 ENSAO43768 121 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 MTRF1O75570 445 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 MUC1P15941 1255 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 EPHA2P29317 976 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 CFHR2P36980 270 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 HILS1P60008 231 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 CDC42P60953 191 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 PRDX4Q13162 271 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 FAM201AQ5SY85 155 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 TEX36Q5VZQ5 186 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF322Q6U7Q0 402 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 COMMD2Q86X83 199 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 SLC35F2Q8IXU6 374 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 ZDHHC23Q8IYP9 409 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 GCSAMQ8N6F7 178 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 PYDC1Q8WXC3 89 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 C12orf43Q96C57 262 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 HIST1H2AAQ96QV6 131 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 TLNRD1Q9H1K6 362 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 ADGRL4Q9HBW9 690 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 WNK2Q9Y3S1 2297 aa14.81□□□□□ -0.04
SHKBP1-204ENST00000594862 SAC3D1A6NKF1 404 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 LHBP01229 141 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 HTR1FP30939 366 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 CXCR4P61073 352 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 PAX2Q02962 417 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 PAX8Q06710 450 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 KPNB1Q14974 876 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 MICBQ29980 383 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 WDR25Q64LD2 544 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 RBMS3Q6XE24 437 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 KRT74Q7RTS7 529 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 THAP5Q7Z6K1 395 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 BOLLQ8N9W6 283 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 SEMA6DQ8NFY4 1073 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 OR10Z1Q8NGY1 313 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 LRRC29Q8WV35 223 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 TRUB1Q8WWH5 349 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 RAB3IPQ96QF0 476 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 PBOV1Q9GZY1 135 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 IMPAD1Q9NX62 359 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 USE1Q9NZ43 259 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 NUP50Q9UKX7 468 aa14.8□□□□□ -0.04
SHKBP1-204ENST00000594862 KIR2DS1A0A191URI9 304 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF850A8MQ14 1090 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 C3orf80F5H4A9 247 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 LOC110117498-PIK3R3F6TDL0 507 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 TRIM77I1YAP6 450 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 M0R129 80 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 ADAM20O43506 726 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms