RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OR51E1Q8TCB6 317 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 TRUB1Q8WWH5 349 aaKnown RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 FAHD2AQ96GK7 314 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 C19orf24Q9BVV8 132 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 C14orf119Q9NWQ9 140 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 C1orf123Q9NWV4 160 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF391Q9UJN7 358 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 R4GMQ9 66 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 PPIAL4EA0A075B759 164 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 ANXA2P2A6NMY6 339 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 CEACAM18A8MTB9 384 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PPIAL4DF5H284 164 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PNPP00491 289 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 OR2T7P0C7T2 308 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PPIAL4FP0DN26 164 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 DCTDP32321 178 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 CD80P33681 288 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 MTNR1AP48039 350 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PRDX4Q13162 271 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 TMED1Q13445 227 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 SNCBQ16143 134 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF181Q2M3W8 571 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 LRRC28Q86X40 367 aaPredicted RBP11.68□□□□□ -0.54
CLIP3-205ENST00000592017 OR2T27Q8NH04 317 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 Q8TCH9 128 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PIGCQ92535 297 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 ERGIC1Q969X5 290 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 RNFT2Q96EX2 444 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 METTL17Q9H7H0 456 aaPredicted RBP11.68□□□□□ -0.54
CLIP3-205ENST00000592017 MOB1AQ9H8S9 216 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 GPR84Q9NQS5 396 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 NUFIP1Q9UHK0 495 aaKnown RBP11.68□□□□□ -0.54
CLIP3-205ENST00000592017 PPIAL4AQ9Y536 164 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 TANC2Q9HCD6 1990 aa11.68□□□□□ -0.54
CLIP3-205ENST00000592017 A0A0U1RQV5 110 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 LOC100130705A0A1B0GUX0 176 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 ACOD1A6NK06 481 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF850A8MQ14 1090 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 E9PQ18 207 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 RPS2P15880 293 aaKnown RBP11.67□□□□□ -0.54
CLIP3-205ENST00000592017 PEX2P28328 305 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 SEC61A1P61619 476 aaKnown RBP11.67□□□□□ -0.54
CLIP3-205ENST00000592017 SNRPGP62308 76 aaKnown RBP11.67□□□□□ -0.54
CLIP3-205ENST00000592017 CSNK2BP67870 215 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 IL5RAQ01344 420 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 GABPB1Q06547 395 aaPredicted RBP11.67□□□□□ -0.54
CLIP3-205ENST00000592017 OCLNQ16625 522 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 MEDAGQ5VYS4 303 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 KCTD8Q6ZWB6 473 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 FAM220AQ7Z4H9 259 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 THAP5Q7Z6K1 395 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 WDR86Q86TI4 376 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 ENTHD1Q8IYW4 607 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF555Q8NEP9 628 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 MICU1Q9BPX6 476 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 RTL8AQ9BWD3 113 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 PATZ1Q9HBE1 687 aaKnown RBP11.67□□□□□ -0.54
CLIP3-205ENST00000592017 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 SMPD3Q9NY59 655 aaPredicted RBP11.67□□□□□ -0.54
CLIP3-205ENST00000592017 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 GNG8Q9UK08 70 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 OR52A1Q9UKL2 312 aa11.67□□□□□ -0.54
CLIP3-205ENST00000592017 LOC105371242A0A075B767 164 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF816-ZNF321PA0A0X1KG74 233 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ERICH4A6NGS2 130 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 METTL15A6NJ78 407 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 SNTNA6NMZ2 147 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
CLIP3-205ENST00000592017 FOXH1O75593 365 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 PTBP3O95758 552 aaKnown RBP11.66□□□□□ -0.54
CLIP3-205ENST00000592017 TTRP02766 147 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
CLIP3-205ENST00000592017 MAP2K3P46734 347 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF85Q03923 595 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF91Q05481 1191 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ODF4Q2M2E3 257 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ZNF404Q494X3 552 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ESCO2Q56NI9 601 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 CEP78Q5JTW2 689 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 DCAF12L2Q5VW00 463 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 LIPNQ5VXI9 398 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 SFRP4Q6FHJ7 346 aaPredicted RBP11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ZDHHC23Q8IYP9 409 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 PLPP7Q8NBV4 271 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 SEMA6DQ8NFY4 1073 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 OR1M1Q8NGA1 313 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 ITPKCQ96DU7 683 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 TMEM246Q9BRR3 403 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 TMPRSS13Q9BYE2 586 aa11.66□□□□□ -0.54
CLIP3-205ENST00000592017 TMEM165Q9HC07 324 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms