RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SMLR1H3BR10 107 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 M0R135 149 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 MASP2O00187 686 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 RAB27BO00194 218 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 CXCL13O43927 109 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 CYTIPO60759 359 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 TRAPPC6AO75865 159 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 HPXP02790 462 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 HPNP05981 417 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 HCKP08631 526 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 GSTP1P09211 210 aaKnown RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 VSIG8P0DPA2 414 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 SLC2A1P11166 492 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 CXCL3P19876 107 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ANXA7P20073 488 aaKnown RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 C4BPBP20851 252 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 DNASE1P24855 282 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 RAD52P43351 418 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 GFRA1P56159 465 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ZP1P60852 638 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 RAP2BP61225 183 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 PCBD1P61457 104 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 GALK2Q01415 458 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 FOXO1Q12778 655 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 AIMP2Q13155 320 aaKnown RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 UNC119Q13432 240 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ACTBL2Q562R1 376 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 WIPI1Q5MNZ9 446 aaPredicted RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 Q6ZTK2 550 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 AAED1Q7RTV5 226 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ACBD4Q8NC06 268 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 BEST4Q8NFU0 473 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 OR2M7Q8NG81 312 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 OR52H1Q8NGJ2 320 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 OR51S1Q8NGJ8 323 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 KCNG3Q8TAE7 436 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ADAMTS17Q8TE56 1095 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 SSC4DQ8WTU2 575 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ZNF799Q96GE5 643 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 GPR137Q96N19 417 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 SEC22CQ9BRL7 303 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 RBM24Q9BX46 236 aaKnown RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 CHST5Q9GZS9 411 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ALX4Q9H161 411 aaPredicted RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 ZNF71Q9NQZ8 489 aaPredicted RBP8.73□□□□□ -1.01
VPS25-202ENST00000589219 DEPPQ9NTK1 212 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 TMEM38BQ9NVV0 291 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 PLEK2Q9NYT0 353 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 MGAT4CQ9UBM8 478 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ATPIF1Q9UII2 106 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 ZNF391Q9UJN7 358 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
VPS25-202ENST00000589219 FREM3P0C091 2139 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 IGKV3D-15A0A087WSY6 115 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 TMEM235A6NFC5 223 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 SGCEO43556 437 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 CD3DP04234 171 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 ABOP16442 354 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 CRYGSP22914 178 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 ALDH3B1P43353 468 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 SLC6A9P48067 706 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 DHODHQ02127 395 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 ARL6IP1Q15041 203 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 MPPED2Q15777 294 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 PNLIPRP3Q17RR3 467 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 MOGAT2Q3SYC2 334 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 RNASE10Q5GAN6 216 aaKnown RBP8.72□□□□□ -1.01
VPS25-202ENST00000589219 DCAF10Q5QP82 559 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 LAMTOR1Q6IAA8 161 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 GLIPR1L1Q6UWM5 242 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 NLRC3Q7RTR2 1065 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 TRAPPC6BQ86SZ2 158 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 FJX1Q86VR8 437 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 ANGPTL5Q86XS5 388 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 ZNF101Q8IZC7 436 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 PAQR4Q8N4S7 273 aaPredicted RBP8.72□□□□□ -1.01
VPS25-202ENST00000589219 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 FER1L6-AS2Q96M78 137 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 NKX3-1Q99801 234 aaPredicted RBP8.72□□□□□ -1.01
VPS25-202ENST00000589219 PRRT1Q99946 306 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 URM1Q9BTM9 101 aaKnown RBP8.72□□□□□ -1.01
VPS25-202ENST00000589219 TMEM59Q9BXS4 323 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 CST11Q9H112 138 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 EXO5Q9H790 373 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 BEX1Q9HBH7 125 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 IFT46Q9NQC8 304 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 ANAPC10Q9UM13 185 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 MGAT4AQ9UM21 535 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 PLEKHA6Q9Y2H5 1048 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 KLF13Q9Y2Y9 288 aaPredicted RBP8.72□□□□□ -1.01
VPS25-202ENST00000589219 PCSK5Q92824 1860 aa8.72□□□□□ -1.01
VPS25-202ENST00000589219 TMEM82A0PJX8 343 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 PINLYPA6NC86 204 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR5H15A6NDH6 313 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 MEIS3P1A6NDR6 274 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR6C6A6NF89 314 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR6C65A6NJZ3 312 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms