RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CARD18P57730 90 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 H3F3AP84243 136 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 TAGLNQ01995 201 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 PMPCAQ10713 525 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF345Q14585 488 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 C11orf88Q6PI97 169 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 NHLRC1Q6VVB1 395 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 HSD17B13Q7Z5P4 300 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 UEVLDQ8IX04 471 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 AQP3Q92482 292 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ADGRG7Q96K78 797 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 UCN2Q96RP3 112 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ARL6Q9H0F7 186 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SDHAF2Q9NX18 166 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 EMC9Q9Y3B6 208 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LIPGQ9Y5X9 500 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LOC107986453A0A1B0GWG9 222 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 CXCL13O43927 109 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 BPNT1O95861 308 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 MGMTP16455 207 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LHX2P50458 406 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 RAC3P60763 192 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ETFDHQ16134 617 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LIN54Q6MZP7 749 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF627Q7L945 461 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OVCH2Q7RTZ1 564 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 DCXRQ7Z4W1 244 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 WDFY1Q8IWB7 410 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZDHHC22Q8N966 263 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR5M9Q8NGP3 310 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR10D3Q8NH80 312 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR2V1Q8NHB1 315 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 DNTTIP1Q9H147 329 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SLC25A32Q9H2D1 315 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 POFUT1Q9H488 388 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 MOB1AQ9H8S9 216 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 KLHL13Q9P2N7 655 aa13.19□□□□□ -0.3
CDK5RAP3-236ENST00000584991 CEP295Q9C0D2 2601 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 A0A1B0GTI1 187 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LOC105371267A0A1B0GV96 52 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 A8MXK9 166 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 K7EM74 188 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 AMY2AP04746 511 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 H2BFMP0C1H6 154 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF735P0CB33 412 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SLC25A4P12235 298 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF43P17038 809 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 BDKRB2P30411 391 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 PLA2G5P39877 138 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 EIF1AXP47813 144 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SRYQ05066 204 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF169Q14929 603 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LRFN4Q6PJG9 635 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF813Q6ZN06 617 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF584Q8IVC4 421 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 EMC6Q9BV81 110 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 MFFQ9GZY8 342 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 PLEKHA6Q9Y2H5 1048 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 DMXL2Q8TDJ6 3036 aa13.18□□□□□ -0.3
CDK5RAP3-236ENST00000584991 MKRN2OSH3BPM6 223 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 DNPH1O43598 174 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR2F2O95006 317 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 UBBP0CG47 229 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 MPGP29372 298 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 BIDP55957 195 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 UBA52P62987 128 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR2F1Q13607 317 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 TBR1Q16650 682 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 THEM4Q5T1C6 240 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 KLHL24Q6TFL4 600 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 CHMP1BQ7LBR1 199 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 PDZD9Q8IXQ8 264 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 BPIFB2Q8N4F0 458 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SLC22A24Q8N4F4 322 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR5M8Q8NGP6 311 aa13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 GDF2Q9UK05 429 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-236ENST00000584991 FXYD6-FXYD2A0A087WZ82 144 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 TRAF3IP2O43734 574 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF708P17019 499 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 CLDN18P56856 261 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 C2orf68Q2NKX9 166 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 PDSS1Q5T2R2 415 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 ZNF529Q6P280 563 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 JAGN1Q8N5M9 183 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR10H5Q8NGA6 315 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR5D14Q8NGL3 314 aa13.16□□□□□ -0.3
CDK5RAP3-236ENST00000584991 OR8S1Q8NH09 359 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms