RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 E9PQ18 207 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 MITFO75030 526 aaPredicted RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 EPHA1P21709 976 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 ACKR3P25106 362 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 HILS1P60008 231 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 SEC61A1P61619 476 aaKnown RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 GNB2P62879 340 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 IL5RAQ01344 420 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 EGR3Q06889 387 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 POU4F2Q12837 409 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 HNRNPA0Q13151 305 aaKnown RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 TMED1Q13445 227 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 TEX36Q5VZQ5 186 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 Q6ZSR3 168 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 KRT77Q7Z794 578 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 C11orf53Q8IXP5 236 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 GCSAMQ8N6F7 178 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 TCEANCQ8N8B7 351 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 OR1M1Q8NGA1 313 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 OR8B12Q8NGG6 310 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 OR8J1Q8NGP2 316 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 OR8S1Q8NH09 359 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 ZNF418Q8TF45 676 aaPredicted RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 TRUB1Q8WWH5 349 aaKnown RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 RAB40AQ8WXH6 277 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 DVL3Q92997 716 aaPredicted RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 LYZL4Q96KX0 146 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 DMRTB1Q96MA1 342 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 OR8B4Q96RC9 309 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 JMJD8Q96S16 334 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 SUCNR1Q9BXA5 334 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 MOB1AQ9H8S9 216 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 MMP26Q9NRE1 261 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 UFSP2Q9NUQ7 469 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 CLN6Q9NWW5 311 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 FAM206AQ9NX38 181 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 USE1Q9NZ43 259 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 H2AFY2Q9P0M6 372 aaPredicted RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 KAAG1Q9UBP8 84 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 OR5V1Q9UGF6 321 aa8.26□□□□□ -1.09
SKA2-208ENST00000583927 WARS2Q9UGM6 360 aaKnown RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 NUFIP1Q9UHK0 495 aaKnown RBP8.26□□□□□ -1.09
SKA2-208ENST00000583927 IGHV2-70DA0A0C4DH43 119 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 KIR2DS1A0A191URI9 304 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 TMEM269A0A1B0GVZ9 245 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 OOEPA6NGQ2 149 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 ANXA2P2A6NMY6 339 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 DHRS7CA6NNS2 312 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 SRRM5B3KS81 715 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 SRSF10O75494 262 aaKnown RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 ZNF205O95201 554 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 ALPLP05186 524 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 MUC1P15941 1255 aaPredicted RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 RBMXP38159 391 aaKnown RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 GNALP38405 381 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 MAP2K3P46734 347 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 PITPNBP48739 271 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 RIDAP52758 137 aaKnown RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 ZNF829Q3KNS6 432 aaPredicted RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 SLC25A30Q5SVS4 291 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 FAM201AQ5SY85 155 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 CD276Q5ZPR3 534 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 WDR25Q64LD2 544 aaPredicted RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 OR10Z1Q8NGY1 313 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 UPRTQ96BW1 309 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 C12orf43Q96C57 262 aaKnown RBP8.25□□□□□ -1.09
SKA2-208ENST00000583927 MICU1Q9BPX6 476 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 MRI1Q9BV20 369 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 C19orf24Q9BVV8 132 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 DNTTIP1Q9H147 329 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 ADGRL4Q9HBW9 690 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 BRD7Q9NPI1 651 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 CLN8Q9UBY8 286 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 COPS3Q9UNS2 423 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 RHBDD3Q9Y3P4 386 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 N6AMT1Q9Y5N5 214 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 AUP1Q9Y679 476 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 FBN3Q75N90 2809 aa8.25□□□□□ -1.09
SKA2-208ENST00000583927 IGHV3-64DA0A0J9YX35 117 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 ZNF816-ZNF321PA0A0X1KG74 233 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 PRR32B1ATL7 298 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 H3BNX3 289 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 EBAG9O00559 213 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 GPR37O15354 613 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 LIPFP07098 398 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 GRPP07492 148 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 OR2T7P0C7T2 308 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 FPR2P25090 351 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 HTR1FP30939 366 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 CD80P33681 288 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 HCCSP53701 268 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 BPIFB3P59826 476 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 CDC42P60953 191 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 CXCR4P61073 352 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 PRDX4Q13162 271 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 ATPAF1Q5TC12 328 aaPredicted RBP8.24□□□□□ -1.09
SKA2-208ENST00000583927 ZNF322Q6U7Q0 402 aaPredicted RBP8.24□□□□□ -1.09
SKA2-208ENST00000583927 BTNL3Q6UXE8 466 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 WDR82Q6UXN9 313 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms