RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 UNQ6494/PRO21346Q6UXR6 183 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 SNIP1Q8TAD8 396 aaKnown RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 NPRL2Q8WTW4 380 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 FAHD2AQ96GK7 314 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 TIMM29Q9BSF4 260 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 EGLN1Q9GZT9 426 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 SLC5A7Q9GZV3 580 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 BANF2Q9H503 90 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 IL17BQ9UHF5 180 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 ICAM5Q9UMF0 924 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 LOC107986453A0A1B0GWG9 222 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF724A8MTY0 619 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF705FA8MVS1 300 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 GPR89AB7ZAQ6 455 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 GEMIN2O14893 280 aaKnown RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 CRTAPO75718 401 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF735P0CB33 412 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 GPR89BP0CG08 455 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF705DP0CH99 300 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF705BP0CI00 300 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZP2Q05996 745 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 FOXO1Q12778 655 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 VN1R4Q7Z5H5 301 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF595Q8IYB9 648 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 C1orf87Q8N0U7 546 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 COMMD1Q8N668 190 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 OR2L8Q8NGY9 312 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 AQP10Q96PS8 301 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 OR5B2Q96R09 309 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 PRRX2Q99811 253 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 MTIF3Q9H2K0 278 aaKnown RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 MYOZ1Q9NP98 299 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 GPR27Q9NS67 375 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 C1orf123Q9NWV4 160 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 GAB2Q9UQC2 676 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM184BQ9Y519 407 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 TGIF2-C20orf24A0A0A6YYL0 155 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 H3BQ15 152 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 SYT7O43581 403 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 HCRTR1O43613 425 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 FGF17O60258 216 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 BRINP1O60477 761 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 KLF8O95600 359 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 H2BFMP0C1H6 154 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 NTSR1P30989 418 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 SNCAP37840 140 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 KIR3DL2P43630 455 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 NHLH2Q02577 135 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 EGR3Q06889 387 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 CEBPEQ15744 281 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF776Q68DI1 518 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ANGPTL5Q86XS5 388 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 SULF2Q8IWU5 870 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 C17orf78Q8N4C9 275 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ARHGEF39Q8N4T4 335 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 FAM210BQ96KR6 192 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 AMELYQ99218 206 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 SLC2A8Q9NY64 477 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 B3GALT1Q9Y5Z6 326 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 TDRD6O60522 2096 aaKnown RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 TRBV5-7A0A0A0MS05 114 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 CCDC163A0A0D9SF12 145 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 PRSS38A1L453 326 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 PRKNO60260 465 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 DFFBO76075 338 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 CELA2BP08218 269 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 SFTPCP11686 197 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 KLK2P20151 261 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 DMRTC1Q5HYR2 192 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF429Q86V71 674 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZFP62Q8NB50 900 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF248Q8NDW4 579 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 OR10AD1Q8NGE0 317 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 RAB39BQ96DA2 213 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
CCDC40-212ENST00000574799 MAP1BP46821 2468 aaKnown RBP8.53□□□□□ -1.04
CCDC40-212ENST00000574799 IGHV4-34P06331 123 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 CTSBP07858 339 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 MELTFP08582 738 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 RPL29P47914 159 aaKnown RBP8.52□□□□□ -1.04
CCDC40-212ENST00000574799 GNMTQ14749 295 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 CLEC12BQ2HXU8 276 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 LINC01590Q5TEZ4 76 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 FCRL6Q6DN72 434 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 PLXDC2Q6UX71 529 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 LINC00346Q8IVM7 164 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 C19orf47Q8N9M1 422 aaKnown RBP8.52□□□□□ -1.04
CCDC40-212ENST00000574799 LFNGQ8NES3 379 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 OR14C36Q8NHC7 312 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 BSCL2Q96G97 398 aaPredicted RBP8.52□□□□□ -1.04
CCDC40-212ENST00000574799 SERINC2Q96SA4 455 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms