RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZNF322Q6U7Q0 402 aaPredicted RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 DCDC5Q6ZRR9 648 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 C1QL2Q7Z5L3 287 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 FTMTQ8N4E7 242 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 TEX29Q8N6K0 151 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 DEFB108BQ8NET1 73 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 OR51G2Q8NGK0 314 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 OR8J1Q8NGP2 316 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 ITPKCQ96DU7 683 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 NEIL1Q96FI4 390 aaPredicted RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 SSBP3Q9BWW4 388 aaPredicted RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 NUFIP1Q9UHK0 495 aaKnown RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 IKZF2Q9UKS7 526 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 INSIG2Q9Y5U4 225 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 E9PQ18 207 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF670-ZNF695F2Z2N8 137 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 LGALS8O00214 317 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 MAGEB4O15481 346 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-220ENST00000569916 CST4P01036 141 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 FSHBP01225 129 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 LHBP01229 141 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 EGR1P18146 543 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 ADRA2CP18825 462 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 ALDH3A2P51648 485 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 CDC42P60953 191 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 GNB2P62879 340 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 CSNK2BP67870 215 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 PAX2Q02962 417 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 EGR3Q06889 387 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 PRDX4Q13162 271 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 KRTAP24-1Q3LI83 254 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-220ENST00000569916 SSX6Q7RTT6 188 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 PHC2Q8IXK0 858 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 CBR4Q8N4T8 237 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 OR1M1Q8NGA1 313 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 FAM81AQ8TBF8 368 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 HPSE2Q8WWQ2 592 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 TMEM158Q8WZ71 300 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 EME1Q96AY2 570 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 HRASLS5Q96KN8 279 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 RAB3IPQ96QF0 476 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-220ENST00000569916 OR8B2Q96RD0 313 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 APOL4Q9BPW4 351 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 FGF23Q9GZV9 251 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-220ENST00000569916 PBOV1Q9GZY1 135 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 C7orf69Q9H7B7 122 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 S100A14Q9HCY8 104 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 CTSZQ9UBR2 303 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 OR5V1Q9UGF6 321 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 MRM2Q9UI43 246 aaKnown RBP10.88□□□□□ -0.67
CNOT1-220ENST00000569916 MPC1Q9Y5U8 109 aa10.88□□□□□ -0.67
CNOT1-220ENST00000569916 COL6A5A8TX70 2615 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 hCG_1807616A0A1W2PRN6 198 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 ANXA2P2A6NMY6 339 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF850A8MQ14 1090 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 C3orf80F5H4A9 247 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 TCF21O43680 179 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 APOL3O95236 402 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 TTRP02766 147 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 EPHA1P21709 976 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 PSMB10P40306 273 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 PITPNBP48739 271 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 IL5RAQ01344 420 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 POU4F2Q12837 409 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 ZIK1Q3SY52 487 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-220ENST00000569916 WDR82Q6UXN9 313 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF841Q6ZN19 808 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 PLEKHG7Q6ZR37 379 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 NLRC3Q7RTR2 1065 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 KRT74Q7RTS7 529 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 C10orf67Q8IYJ2 551 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 GALNT4Q8N4A0 578 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 BOLLQ8N9W6 283 aaKnown RBP10.87□□□□□ -0.67
CNOT1-220ENST00000569916 OR51E1Q8TCB6 317 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 OR5P3Q8WZ94 311 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 UBE2FQ969M7 185 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 PPP1R14AQ96A00 147 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 DACT3Q96B18 629 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-220ENST00000569916 MBOAT4Q96T53 435 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 TBX5Q99593 518 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 RTL8AQ9BWD3 113 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 TLNRD1Q9H1K6 362 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 MOB1AQ9H8S9 216 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 RNPEPL1Q9HAU8 725 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 ABCB9Q9NP78 766 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 GPR84Q9NQS5 396 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 ORC6Q9Y5N6 252 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 R4GMQ9 66 aa10.87□□□□□ -0.67
CNOT1-220ENST00000569916 IGHV2-70DA0A0C4DH43 119 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF816-ZNF321PA0A0X1KG74 233 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-220ENST00000569916 OOEPA6NGQ2 149 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 LOC110117498-PIK3R3F6TDL0 507 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-220ENST00000569916 HAX1O00165 279 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms