RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 APLNRP35414 380 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 TIMP3P35625 211 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 SCAND1P57086 179 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 UNC119Q13432 240 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 GK2Q14410 553 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 TMEM69Q5SWH9 247 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 ZNF474Q6S9Z5 364 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 RAB40AQ8WXH6 277 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 PP6455Q8WZ26 134 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 FAM46BQ96A09 425 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 FOXRED1Q96CU9 486 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 S100A16Q96FQ6 103 aaKnown RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 C11orf54Q9H0W9 315 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 PTTG3PQ9NZH4 202 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 XRCC2O43543 280 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 ERCC1P07992 297 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 RIPPLY1Q0D2K3 151 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 OR8B8Q15620 311 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 UTS2BQ765I0 119 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 DPPA2Q7Z7J5 298 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 COX4I2Q96KJ9 171 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 UQCC2Q9BRT2 126 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 THAP7Q9BT49 309 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 RGCCQ9H4X1 137 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 SP140LQ9H930 580 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 TUBD1Q9UJT1 453 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 CEACAM8P31997 349 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 NR4A2P43354 598 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 MAP2K3P46734 347 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 TAS2R20P59543 309 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 DEFA1P59665 94 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 DEFA3P59666 94 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 AWAT2Q6E213 333 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 NRARPQ7Z6K4 114 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 ANGPTL5Q86XS5 388 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 AKAP1Q92667 903 aaKnown RBP eCLIP9.45□□□□□ -0.99e-9■■■■■ 46.9
PDXDC1-216ENST00000569715 YIPF5Q969M3 257 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 APOBEC3DQ96AK3 386 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 C1orf147Q96MC9 270 aaPredicted RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 NEDD4LQ96PU5 975 aa9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 TPRP12270 2363 aaKnown RBP9.45□□□□□ -0.9
PDXDC1-216ENST00000569715 DHRS7CA6NNS2 312 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 PRRG2O14669 202 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 PTTG1O95997 202 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 PRF1P14222 555 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 SRP9P49458 86 aaKnown RBP9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 QRFPP83859 136 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 ASAH1Q13510 395 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 KISS1Q15726 138 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 TP63Q9H3D4 680 aaPredicted RBP9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 RELNP78509 3460 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 GMDSO60547 372 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 CRHP06850 196 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 PMPCAQ10713 525 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 MOGAT2Q3SYC2 334 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 SPATA46Q5T0L3 261 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 C1QL2Q7Z5L3 287 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 OR56B2PQ8NGI1 322 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 UBASH3BQ8TF42 649 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 ITFG2Q969R8 447 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 C10orf35Q96D05 121 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 GPER1Q99527 375 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 ATG5Q9H1Y0 275 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 ZNF391Q9UJN7 358 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 MRPS28Q9Y2Q9 187 aaKnown RBP9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 A0A1W2PP11 408 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 MEIOCA2RUB1 952 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 MMP15P51511 669 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 TMEM42Q69YG0 159 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 GLIPR1L1Q6UWM5 242 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 RTN4RL2Q86UN3 420 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 TMEM104Q8NE00 496 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 C19orf18Q8NEA5 215 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 CCDC54Q8NEL0 328 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 C1orf162Q8NEQ5 155 aaPredicted RBP9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 FAM122AQ96E09 287 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 CYYR1Q96J86 154 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 FAM210AQ96ND0 272 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 ZNF835Q9Y2P0 537 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 SHANK1Q9Y566 2161 aa9.44□□□□□ -0.9
PDXDC1-216ENST00000569715 IGKV1-27A0A075B6S5 117 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 GGT3PA6NGU5 568 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 ALDOBP05062 364 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 ZNF57Q68EA5 555 aaPredicted RBP9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 BAIAP2L2Q6UXY1 529 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 GLCCI1Q86VQ1 547 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 SETD6Q8TBK2 473 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 SMIM4Q8WVI0 70 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 A0A0G2JNJ9 132 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 XRCC3O43542 346 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 BPNT1O95861 308 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 FAM157BP0CG42 384 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 BMP5P22003 454 aa9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 CCBE1Q6UXH8 406 aaPredicted RBP9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 BHLHA15Q7RTS1 189 aaPredicted RBP9.43□□□□□ -0.9
PDXDC1-216ENST00000569715 ACBD4Q8NC06 268 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms