RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SRRM5B3KS81 715 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 C3orf80F5H4A9 247 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 SRSF10O75494 262 aaKnown RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 GRPP07492 148 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L2P0CJ85 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L3P0CJ86 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L4P0CJ87 422 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L5P0CJ88 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L6P0CJ89 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L7P0CJ90 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 AMY2BP19961 511 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 CFL1P23528 166 aaKnown RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 DCTDP32321 178 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 CFHR2P36980 270 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 HCCSP53701 268 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 ROM1Q03395 351 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 PTGES3Q15185 160 aaKnown RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 GFOD2Q3B7J2 385 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 SLX4IPQ5VYV7 408 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 C12orf73Q69YU5 71 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 KDM4DQ6B0I6 523 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 SFRP4Q6FHJ7 346 aaPredicted RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4L9Q6RFH8 374 aaPredicted RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 BTNL3Q6UXE8 466 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 BCDIN3DQ7Z5W3 292 aaKnown RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 FGFRL1Q8N441 504 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 OR5K1Q8NHB7 308 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 PGAM5Q96HS1 289 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 JMJD8Q96S16 334 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 TEAD3Q99594 435 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 NUDT16L1Q9BRJ7 211 aaKnown RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 PAPOLGQ9BWT3 736 aaKnown RBP6.49□□□□□ -1.37
CDH3-209ENST00000569080 YIPF3Q9GZM5 350 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 SP140LQ9H930 580 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 RNPEPL1Q9HAU8 725 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 BRD7Q9NPI1 651 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 C14orf119Q9NWQ9 140 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 TVP23BQ9NYZ1 205 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 KIF17Q9P2E2 1029 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 KAAG1Q9UBP8 84 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DUX4Q9UBX2 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 IGHV3OR15-7A0A075B7D8 119 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 IGHV3OR16-10A0A075B7F0 116 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 TRAV38-1A0A0B4J264 116 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.48□□□□□ -1.37
CDH3-209ENST00000569080 A0A0U1RQV5 110 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 MDFIC2A0A1B0GVS7 189 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 CLDN34H7C241 214 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 TRIM77I1YAP6 450 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 PSMD9O00233 223 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 ADAM20O43506 726 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 ENSAO43768 121 aaKnown RBP6.48□□□□□ -1.37
CDH3-209ENST00000569080 CST4P01036 141 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 GYPAP02724 150 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 SFTPBP07988 381 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 MRPL3P09001 348 aaKnown RBP6.48□□□□□ -1.37
CDH3-209ENST00000569080 CFPP27918 469 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 NPY4RP50391 375 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 FGF12P61328 243 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 RPS7P62081 194 aaKnown RBP6.48□□□□□ -1.37
CDH3-209ENST00000569080 ESRRGP62508 458 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 ACTG1P63261 375 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 MFGE8Q08431 387 aaPredicted RBP6.48□□□□□ -1.37
CDH3-209ENST00000569080 MZT1Q08AG7 82 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 KCNJ8Q15842 424 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 SNAPC1Q16533 368 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 FAM76BQ5HYJ3 339 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 WDR38Q5JTN6 314 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 STUMQ69YW2 141 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 DEGS2Q6QHC5 323 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 GALNT4Q8N4A0 578 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 CSNK2A3Q8NEV1 391 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 OR8S1Q8NH09 359 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 THEM6Q8WUY1 208 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 LRRC29Q8WV35 223 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 OR5P3Q8WZ94 311 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 SEH1LQ96EE3 360 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 TECTBQ96PL2 329 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 OR8B4Q96RC9 309 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 TBX15Q96SF7 602 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 PKP2Q99959 881 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 TTTY10Q9BZA0 68 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 MMADHCQ9H3L0 296 aaPredicted RBP6.48□□□□□ -1.37
CDH3-209ENST00000569080 PRDM13Q9H4Q3 707 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 NIPAL2Q9H841 368 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 ADGRL4Q9HBW9 690 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 TRIM36Q9NQ86 728 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 KRT84Q9NSB2 600 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 ZNF391Q9UJN7 358 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 LAMP5Q9UJQ1 280 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 MPC1Q9Y5U8 109 aa6.48□□□□□ -1.37
CDH3-209ENST00000569080 hCG_1807616A0A1W2PRN6 198 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 ZNF850A8MQ14 1090 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 CDIPTO14735 213 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 NDUFA2O43678 99 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 SELLP14151 372 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 MUC1P15941 1255 aaPredicted RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 PRTN3P24158 256 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms