RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GFOD2Q3B7J2 385 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 DMRTC1Q5HYR2 192 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 DNM1P34Q6PK57 102 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 OR9Q1Q8NGQ5 310 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 CFHR4Q92496 578 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 OR5M11Q96RB7 305 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 FUZQ9BT04 418 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 DCTN5Q9BTE1 182 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 ARL2BPQ9Y2Y0 163 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 CDIPTO14735 213 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 TBX1O43435 398 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
USB1-214ENST00000568848 GYPBP06028 91 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 EEF1B2P24534 225 aaKnown RBP12.09□□□□□ -0.47
USB1-214ENST00000568848 KLHL12Q53G59 568 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 STUMQ69YW2 141 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 DPY19L4Q7Z388 723 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 DCXRQ7Z4W1 244 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 ZBTB46Q86UZ6 589 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 OR1M1Q8NGA1 313 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 OR8S1Q8NH09 359 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 RPL3LQ92901 407 aaKnown RBP12.09□□□□□ -0.47
USB1-214ENST00000568848 GAFA1Q96PS6 74 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 NDEL1Q9GZM8 345 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 CENPMQ9NSP4 180 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 DCAF13Q9NV06 445 aaKnown RBP12.09□□□□□ -0.47
USB1-214ENST00000568848 MRPL15Q9P015 296 aaKnown RBP12.09□□□□□ -0.47
USB1-214ENST00000568848 TAGLN3Q9UI15 199 aa12.09□□□□□ -0.47
USB1-214ENST00000568848 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 NDUFB3O43676 98 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 NDUFA2O43678 99 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 ANGPTL7O43827 346 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 SPARCP09486 303 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 RAB13P51153 203 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.08□□□□□ -0.48
USB1-214ENST00000568848 MICBQ29980 383 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 TMEM95Q3KNT9 176 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 FOXB2Q5VYV0 432 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 PGM2L1Q6PCE3 622 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 CRIP3Q6Q6R5 217 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 Q6ZS46 218 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 SLC16A9Q7RTY1 509 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 CYP4Z1Q86W10 505 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 ZNF511Q8NB15 262 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 C7orf34Q96L11 122 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
USB1-214ENST00000568848 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 DNAJC27Q9NZQ0 273 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 ZNF319Q9P2F9 582 aa12.08□□□□□ -0.48
USB1-214ENST00000568848 A0A1W2PQ09 198 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 A0A1W2PRQ8 180 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
USB1-214ENST00000568848 AKR7A2O43488 359 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 CLUP10909 449 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 IGLL1P15814 213 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 JUNBP17275 347 aaPredicted RBP12.07□□□□□ -0.48
USB1-214ENST00000568848 NDUFB7P17568 137 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 TGM4P49221 684 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 FAM3AP98173 230 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 DGCR6Q14129 220 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 SLC36A3Q495N2 470 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 METAP1DQ6UB28 335 aaPredicted RBP12.07□□□□□ -0.48
USB1-214ENST00000568848 PGAM4Q8N0Y7 254 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 DYNAPQ8N1N2 210 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 GALNT4Q8N4A0 578 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 BEND2Q8NDZ0 799 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 PROKR2Q8NFJ6 384 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 OR4C13Q8NGP0 309 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 SGK3Q96BR1 496 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 DUS3LQ96G46 650 aaKnown RBP12.07□□□□□ -0.48
USB1-214ENST00000568848 CLPTM1LQ96KA5 538 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 ZNF702PQ9H963 129 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 BRD7Q9NPI1 651 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 TRIM36Q9NQ86 728 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 CD300AQ9UGN4 299 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 RHBDD3Q9Y3P4 386 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 FAM32AQ9Y421 112 aaKnown RBP12.07□□□□□ -0.48
USB1-214ENST00000568848 COMMD3-BMI1R4GMX3 469 aa12.07□□□□□ -0.48
USB1-214ENST00000568848 K7EIL1 84 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 GMNNO75496 209 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 DCTN3O75935 186 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 HSD17B1P14061 328 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 ZNF823P16415 610 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 RHCEP18577 417 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 COX7A1P24310 79 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 NOS3P29474 1203 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 SLC6A6P31641 620 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 OTX1P32242 354 aaPredicted RBP12.06□□□□□ -0.48
USB1-214ENST00000568848 KIR2DS4P43632 304 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 SLC36A1Q7Z2H8 476 aa12.06□□□□□ -0.48
USB1-214ENST00000568848 TMEM219Q86XT9 240 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms