RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 H2BFMP0C1H6 154 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 CFL1P23528 166 aaKnown RBP12.07□□□□□ -0.48
CMTM3-215ENST00000568477 OPRL1P41146 370 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 CDK5Q00535 292 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 KLHL12Q53G59 568 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 FAM57BQ71RH2 274 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 RHOUQ7L0Q8 258 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 SLC16A9Q7RTY1 509 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 THAP5Q7Z6K1 395 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 C8orf59Q8N0T1 100 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-215ENST00000568477 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 SETD9Q8NE22 299 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 OR52H1Q8NGJ2 320 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 C22orf15Q8WYQ4 148 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 DVL3Q92997 716 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-215ENST00000568477 REEP6Q96HR9 211 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 AMELYQ99218 206 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 GABARAPL3Q9BY60 117 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 MRPS26Q9BYN8 205 aaKnown RBP12.07□□□□□ -0.48
CMTM3-215ENST00000568477 OR10A2Q9H208 303 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 SLC25A19Q9HC21 320 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 C14orf119Q9NWQ9 140 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 DNAJC27Q9NZQ0 273 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 ENOPH1Q9UHY7 261 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 NUP50Q9UKX7 468 aa12.07□□□□□ -0.48
CMTM3-215ENST00000568477 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 A6NLC8 198 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 E9PQ18 207 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 LGALS8O00214 317 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 SELENOFO60613 162 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 MITFO75030 526 aaPredicted RBP12.06□□□□□ -0.48
CMTM3-215ENST00000568477 ZNF121P58317 390 aaPredicted RBP12.06□□□□□ -0.48
CMTM3-215ENST00000568477 RPS7P62081 194 aaKnown RBP12.06□□□□□ -0.48
CMTM3-215ENST00000568477 ACTG1P63261 375 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 FAM3AP98173 230 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 PAX2Q02962 417 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 PAX8Q06710 450 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 KCNJ8Q15842 424 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 LRRN1Q6UXK5 716 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.06□□□□□ -0.48
CMTM3-215ENST00000568477 BOLLQ8N9W6 283 aaKnown RBP12.06□□□□□ -0.48
CMTM3-215ENST00000568477 C19orf18Q8NEA5 215 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 OR8S1Q8NH09 359 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 OTOSQ8NHW6 89 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 RAB40AQ8WXH6 277 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 SGK3Q96BR1 496 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 PGAM5Q96HS1 289 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 PAPOLBQ9NRJ5 636 aaKnown RBP12.06□□□□□ -0.48
CMTM3-215ENST00000568477 C1orf123Q9NWV4 160 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 CLN8Q9UBY8 286 aa12.06□□□□□ -0.48
CMTM3-215ENST00000568477 IGHV2-70DA0A0C4DH43 119 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 hCG_38984A0A1B0GV85 526 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 PHYHO14832 338 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 CLIC3O95833 236 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 GRPP07492 148 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 SMIM18P0DKX4 95 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 CD80P33681 288 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 NAA10P41227 235 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-215ENST00000568477 APOFQ13790 326 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 GFOD2Q3B7J2 385 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-215ENST00000568477 SLC35D3Q5M8T2 416 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 ZNF691Q5VV52 312 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 TMEM236Q5W0B7 351 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 WDR25Q64LD2 544 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-215ENST00000568477 LYPD2Q6UXB3 125 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 C12orf54Q6X4T0 127 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 RBMS3Q6XE24 437 aaKnown RBP12.05□□□□□ -0.48
CMTM3-215ENST00000568477 PRSS45Q7RTY3 260 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 PARP8Q8N3A8 854 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 BBS1Q8NFJ9 593 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 FBLIM1Q8WUP2 373 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 THEM6Q8WUY1 208 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 RIBC2Q9H4K1 309 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 RGCCQ9H4X1 137 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 BRD7Q9NPI1 651 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 TRIM36Q9NQ86 728 aa12.05□□□□□ -0.48
CMTM3-215ENST00000568477 hCG_1807616A0A1W2PRN6 198 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 DPPA5A6NC42 116 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 PPIAL4GP0DN37 164 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 GNALP38405 381 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 PSMB10P40306 273 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 GSK3AP49840 483 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 ISL1P61371 349 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 OR8B8Q15620 311 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 SNAPC1Q16533 368 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 RBM48Q5RL73 367 aaKnown RBP12.04□□□□□ -0.48
CMTM3-215ENST00000568477 SFRP4Q6FHJ7 346 aaPredicted RBP12.04□□□□□ -0.48
CMTM3-215ENST00000568477 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 TSPAN14Q8NG11 270 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 DACT3Q96B18 629 aaPredicted RBP12.04□□□□□ -0.48
CMTM3-215ENST00000568477 APOL4Q9BPW4 351 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 NUDT16L1Q9BRJ7 211 aaKnown RBP12.04□□□□□ -0.48
CMTM3-215ENST00000568477 NIPAL2Q9H841 368 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 TVP23BQ9NYZ1 205 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 ZNF69Q9UC07 566 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms