RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PARP8Q8N3A8 854 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ZDHHC22Q8N966 263 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 CSNK2A3Q8NEV1 391 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 OR8S1Q8NH09 359 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 OR5K1Q8NHB7 308 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 THEM6Q8WUY1 208 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 C22orf15Q8WYQ4 148 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 GCDHQ92947 438 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 UTP4Q969X6 686 aaKnown RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 DACT3Q96B18 629 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 SGK3Q96BR1 496 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 UPRTQ96BW1 309 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 PGAM5Q96HS1 289 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 TECTBQ96PL2 329 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 AMELYQ99218 206 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 NUDT16L1Q9BRJ7 211 aaKnown RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 PRRG3Q9BZD7 231 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 YIPF3Q9GZM5 350 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 MMADHCQ9H3L0 296 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 RGCCQ9H4X1 137 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 NIPAL2Q9H841 368 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ZMAT3Q9HA38 289 aaKnown RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 SLC25A19Q9HC21 320 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ABCB9Q9NP78 766 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ESM1Q9NQ30 184 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 PAPOLBQ9NRJ5 636 aaKnown RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 C1orf123Q9NWV4 160 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 DNAJC27Q9NZQ0 273 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ERVK-18Q9QC07 812 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 LAMP5Q9UJQ1 280 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 CMYA5Q8N3K9 4069 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ACOD1A6NK06 481 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TMEM210A6NLX4 147 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ANXA2P2A6NMY6 339 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 G3V2T6 193 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 EREGO14944 169 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ADAM20O43506 726 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 SELENOFO60613 162 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ATP5HO75947 161 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 PLATP00750 562 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 CST4P01036 141 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 LHBP01229 141 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 GYPAP02724 150 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 RPLP1P05386 114 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 LIPFP07098 398 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 IGHV4-38-2P0DP08 117 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 FCGR1AP12314 374 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 MUC1P15941 1255 aaPredicted RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 ALOX5APP20292 161 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 PRTN3P24158 256 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 CFPP27918 469 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 CFHR2P36980 270 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 GNALP38405 381 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 NAA10P41227 235 aaPredicted RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 MTNR1AP48039 350 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 DAPP51397 102 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 CRISP1P54107 249 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 BPIFB3P59826 476 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 RPS7P62081 194 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 ESRRGP62508 458 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 UBA52P62987 128 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 IL5RAQ01344 420 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 BNIP1Q12981 228 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 APOFQ13790 326 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 PTGES3Q15185 160 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 ATP6AP1Q15904 470 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 SNAPC1Q16533 368 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 MICBQ29980 383 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 GFOD2Q3B7J2 385 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ARSJQ5FYB0 599 aaPredicted RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 LCN1P1Q5VSP4 162 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TEX36Q5VZQ5 186 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TMEM236Q5W0B7 351 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 SFRP4Q6FHJ7 346 aaPredicted RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 FAHD1Q6P587 224 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 DEGS2Q6QHC5 323 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 LYPD2Q6UXB3 125 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 C9orf139Q6ZV77 190 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 KRT77Q7Z794 578 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 FAM90A1Q86YD7 464 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 GALNT4Q8N4A0 578 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 GCSAMQ8N6F7 178 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 SIGLECL1Q8N7X8 197 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 BOLLQ8N9W6 283 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 PNLDC1Q8NA58 520 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 C19orf18Q8NEA5 215 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 BBS1Q8NFJ9 593 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 OR1M1Q8NGA1 313 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ITFG2Q969R8 447 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 SLC25A28Q96A46 364 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 C12orf43Q96C57 262 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 TEAD3Q99594 435 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 MICU1Q9BPX6 476 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 RTL8AQ9BWD3 113 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 PAPOLGQ9BWT3 736 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 CADM1Q9BY67 442 aaKnown RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 MS4A7Q9GZW8 240 aaPredicted RBP3.98□□□□□ -1.77
CLK3-219ENST00000567805 TLNRD1Q9H1K6 362 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 RNPEPL1Q9HAU8 725 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms