RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SEH1LQ96EE3 360 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 MMADHCQ9H3L0 296 aaPredicted RBP12.17□□□□□ -0.46
FANCA-220ENST00000566409 C14orf119Q9NWQ9 140 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 LRP12Q9Y561 859 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 MGAM2Q2M2H8 2515 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.16□□□□□ -0.46
FANCA-220ENST00000566409 hCG_1807616A0A1W2PRN6 198 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 M0R129 80 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 PSMD9O00233 223 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 ADAM20O43506 726 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 PLATP00750 562 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 GYPAP02724 150 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 MRPL3P09001 348 aaKnown RBP12.16□□□□□ -0.46
FANCA-220ENST00000566409 CFL1P23528 166 aaKnown RBP12.16□□□□□ -0.46
FANCA-220ENST00000566409 CFPP27918 469 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
FANCA-220ENST00000566409 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
FANCA-220ENST00000566409 ATP6AP1Q15904 470 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 TEX36Q5VZQ5 186 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 FGFRL1Q8N441 504 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 DUX5Q96PT3 197 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 YIPF3Q9GZM5 350 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 TLNRD1Q9H1K6 362 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 RGCCQ9H4X1 137 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 LAMP5Q9UJQ1 280 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 COPS3Q9UNS2 423 aa12.16□□□□□ -0.46
FANCA-220ENST00000566409 TRRAPQ9Y4A5 3859 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 A0A1B0GW55 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 FGF12P61328 243 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 ESRRGP62508 458 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 ACTG1P63261 375 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 MZT1Q08AG7 82 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.46
FANCA-220ENST00000566409 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 GALNT4Q8N4A0 578 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 LRRC29Q8WV35 223 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 GCDHQ92947 438 aaPredicted RBP12.15□□□□□ -0.46
FANCA-220ENST00000566409 PPP1R14AQ96A00 147 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUS3LQ96G46 650 aaKnown RBP12.15□□□□□ -0.46
FANCA-220ENST00000566409 TECTBQ96PL2 329 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 PAPOLGQ9BWT3 736 aaKnown RBP12.15□□□□□ -0.46
FANCA-220ENST00000566409 NIPAL2Q9H841 368 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 RNPEPL1Q9HAU8 725 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 FAM206AQ9NX38 181 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 ERVK-18Q9QC07 812 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
FANCA-220ENST00000566409 TRAV40A0A0B4J280 105 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 DNAJC9-AS1A6NH13 148 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 ZAR1LA6NP61 321 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 ZNF850A8MQ14 1090 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 G3V2T6 193 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 HAX1O00165 279 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 CDIPTO14735 213 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 NDUFA2O43678 99 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 CST4P01036 141 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 SFTPBP07988 381 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 MMP9P14780 707 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 AMY2BP19961 511 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 PRTN3P24158 256 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 CFHR2P36980 270 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 NPY4RP50391 375 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 ROM1Q03395 351 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 PRDX4Q13162 271 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 KCNJ8Q15842 424 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 AADACL4Q5VUY2 407 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 SLX4IPQ5VYV7 408 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 C12orf73Q69YU5 71 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 KRT74Q7RTS7 529 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 KRT77Q7Z794 578 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 AMIGO2Q86SJ2 522 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 HPSE2Q8WWQ2 592 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 OR5P3Q8WZ94 311 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 TEX12Q9BXU0 123 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 TTTY10Q9BZA0 68 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
FANCA-220ENST00000566409 KRT84Q9NSB2 600 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 KAAG1Q9UBP8 84 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 AP4S1Q9Y587 144 aa12.14□□□□□ -0.47
FANCA-220ENST00000566409 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 SRRM5B3KS81 715 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 DVL1O14640 695 aa12.13□□□□□ -0.47
FANCA-220ENST00000566409 MAGEB4O15481 346 aaPredicted RBP12.13□□□□□ -0.47
FANCA-220ENST00000566409 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
FANCA-220ENST00000566409 IGLV3-1P01715 115 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms