RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SIRPDQ9H106 197 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 OR10A2Q9H208 303 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 RNPEPL1Q9HAU8 725 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 KAAG1Q9UBP8 84 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 RHBDD3Q9Y3P4 386 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 CENPVL3A0A0U1RRI6 287 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 A0A1B0GW55 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 AQP12BA6NM10 295 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 SRRM5B3KS81 715 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 PRR23D1E9PI22 279 aaPredicted RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 H2BFMP0C1H6 154 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L2P0CJ85 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L3P0CJ86 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L4P0CJ87 422 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L5P0CJ88 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L6P0CJ89 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L7P0CJ90 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 PRR23D2P0DMB1 279 aaPredicted RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 PAICSP22234 425 aaKnown RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 CFL1P23528 166 aaKnown RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4L9Q6RFH8 374 aaPredicted RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 Q6YL49 198 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 BTN2A1Q7KYR7 527 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 AQP12AQ8IXF9 295 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 PNLDC1Q8NA58 520 aaKnown RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 OTOSQ8NHW6 89 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 SEH1LQ96EE3 360 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 PGAM5Q96HS1 289 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 PAPOLGQ9BWT3 736 aaKnown RBP15.15■□□□□ 0.02
USB1-213ENST00000566292 TLNRD1Q9H1K6 362 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 DUX4Q9UBX2 424 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 KLHDC2Q9Y2U9 406 aa15.15■□□□□ 0.02
USB1-213ENST00000566292 GNGT2O14610 69 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 LYNP07948 512 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 MDKP21741 143 aaPredicted RBP15.14■□□□□ 0.01
USB1-213ENST00000566292 OMGP23515 440 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 ACKR3P25106 362 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 CDK5Q00535 292 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 PRR31Q5SQ13 230 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 CPOQ8IVL8 374 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 CSNK2A3Q8NEV1 391 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 THEM6Q8WUY1 208 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 ST8SIA4Q92187 359 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 TMIGD2Q96BF3 282 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 ITPKCQ96DU7 683 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 CCL13Q99616 98 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 ZNF696Q9H7X3 374 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 TNFRSF19Q9NS68 423 aa15.14■□□□□ 0.01
USB1-213ENST00000566292 TIPRLO75663 272 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 OSMP13725 252 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 MUC1P15941 1255 aaPredicted RBP15.13■□□□□ 0.01
USB1-213ENST00000566292 PRKACGP22612 351 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 NAA10P41227 235 aaPredicted RBP15.13■□□□□ 0.01
USB1-213ENST00000566292 ARF6P62330 175 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 MICBQ29980 383 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 WDR38Q5JTN6 314 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 METTL11BQ5VVY1 283 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 GALNT4Q8N4A0 578 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 ZNF454Q8N9F8 522 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 BBS1Q8NFJ9 593 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 LYZL4Q96KX0 146 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 FGF23Q9GZV9 251 aaPredicted RBP15.13■□□□□ 0.01
USB1-213ENST00000566292 RGCCQ9H4X1 137 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 NOX4Q9NPH5 578 aa15.13■□□□□ 0.01
USB1-213ENST00000566292 RPUSD1Q9UJJ7 312 aaKnown RBP15.13■□□□□ 0.01
USB1-213ENST00000566292 CMYA5Q8N3K9 4069 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 FAM181BA6NEQ2 426 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 POM121CA8CG34 1229 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 CDIPTO14735 213 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 PRODHO43272 600 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 ECDO95905 644 aaPredicted RBP15.12■□□□□ 0.01
USB1-213ENST00000566292 HMGN1P05114 100 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 MELTFP08582 738 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 AMY2BP19961 511 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 SLC2A5P22732 501 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 GNALP38405 381 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 C11orf91Q3C1V1 193 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 TMEM236Q5W0B7 351 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.12■□□□□ 0.01
USB1-213ENST00000566292 FAM216BQ8N7L0 139 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 OR8B12Q8NGG6 310 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 GATAD2BQ8WXI9 593 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 LHX4Q969G2 390 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 CHIAQ9BZP6 476 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 ACOXLQ9NUZ1 547 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 KIF17Q9P2E2 1029 aa15.12■□□□□ 0.01
USB1-213ENST00000566292 IGHV1-69DA0A0B4J2H0 117 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 ANXA2P2A6NMY6 339 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 ZNF850A8MQ14 1090 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 WIPF1O43516 503 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 E2F6O75461 281 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 IGHV1-69P01742 117 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 HCCSP53701 268 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 PSMA6P60900 246 aaKnown RBP15.11■□□□□ 0.01
USB1-213ENST00000566292 IL5RAQ01344 420 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 PRDX4Q13162 271 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 PDCD1Q15116 288 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 SLC35D3Q5M8T2 416 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 FIP1L1Q6UN15 594 aaKnown RBP15.11■□□□□ 0.01
USB1-213ENST00000566292 LY6G5BQ8NDX9 201 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms