RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 NOXO1Q8NFA2 376 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 NUBPLQ8TB37 319 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 FOPNLQ96NB1 174 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 BCL7BQ9BQE9 202 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 FANCEQ9HB96 536 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 RETNQ9HD89 108 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 PSG11Q9UQ72 335 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 LOC285556D6RIA3 1793 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 SCN4AP35499 1836 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 DENND4AQ7Z401 1863 aa2.92□□□□□ -1.94
LINC00560-201ENST00000564593 A0A087X0T9 212 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 A0A1B0GW55 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 NCF1BA6NI72 391 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 NCF1CA8MVU1 366 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 TEX46H3BTG2 121 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 SPOPO43791 374 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 MED6O75586 246 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ZNF189O75820 626 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CCNB2O95067 398 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 LYPLA2O95372 231 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PAEPP09466 180 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 FAM228BP0C875 321 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DUX4L2P0CJ85 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DUX4L3P0CJ86 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DUX4L5P0CJ88 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DUX4L6P0CJ89 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DUX4L7P0CJ90 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 GGT1P19440 569 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CD151P48509 253 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ETV1P50549 477 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 VSX2P58304 361 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 YWHAEP62258 255 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 RAP1AP62834 184 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ARG2P78540 354 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PGGHGQ32M88 737 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 XKR4Q5GH76 650 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 TFDP3Q5H9I0 405 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 LIN9Q5TKA1 542 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PLET1Q6UQ28 207 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CLEC2AQ6UVW9 174 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CCDC121Q6ZUS5 278 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 TRMT10CQ7L0Y3 403 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PRSS58Q8IYP2 241 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 OFCC1Q8IZS5 231 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 RIBC1Q8N443 379 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 OR5W2Q8NH69 310 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 IFT81Q8WYA0 676 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 TM4SF18Q96CE8 201 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 STARD4Q96DR4 205 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 XPO6Q96QU8 1125 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 LXNQ9BS40 222 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DEFB129Q9H1M3 183 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 AUNIPQ9H7T9 357 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CCNB1IP1Q9NPC3 277 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 AGPAT3Q9NRZ7 376 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DUX4Q9UBX2 424 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 COL11A1P12107 1806 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 A0A1W2PP18 115 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 SCAMP2O15127 329 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 SLC25A14O95258 325 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PAHP00439 452 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ARG1P05089 322 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 BCHEP06276 602 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 OR8G3PP0DMU2 310 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CT45A6P0DMU7 189 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CT45A5P0DMU8 189 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CT45A7P0DMV0 189 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ZNF32P17041 273 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PGAM1P18669 254 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 OR1G1P47890 313 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 RWDD2BP57060 319 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PSMC5P62195 406 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CT45A1Q5HYN5 189 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 UBE2UQ5VVX9 321 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 METTL21CQ5VZV1 264 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 APOBEC3HQ6NTF7 200 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 FBXW12Q6X9E4 464 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 C10orf67Q8IYJ2 551 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PGAM4Q8N0Y7 254 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DRAXINQ8NBI3 349 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 OR9G4Q8NGQ1 327 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CT45A3Q8NHU0 189 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ABHD3Q8WU67 409 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 SEH1LQ96EE3 360 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 FRMD8P1Q9BZ68 369 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ACTR3CQ9C0K3 210 aaPredicted RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CENPHQ9H3R5 247 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 RPP21Q9H633 154 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 PATZ1Q9HBE1 687 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 BEX1Q9HBH7 125 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 CTSFQ9UBX1 484 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ZMAT5Q9UDW3 170 aaKnown RBP2.91□□□□□ -1.94
LINC00560-201ENST00000564593 DNAJC12Q9UKB3 198 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 IGSF9BQ9UPX0 1349 aa2.91□□□□□ -1.94
LINC00560-201ENST00000564593 ZSWIM8A7E2V4 1837 aa2.9□□□□□ -1.94
LINC00560-201ENST00000564593 FER1L6Q2WGJ9 1857 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 IGLV1-36A0A0B4J1U3 117 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 KBTBD11-OT1A0A1B0GTJ5 212 aa2.9□□□□□ -1.95
LINC00560-201ENST00000564593 LINC00854A0A1B0GVQ3 168 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms