RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	SAP30L	Q9HAJ7	183 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CHST11	Q9NPF2	352 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ADAP2	Q9NPF8	381 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CYTL1	Q9NRR1	136 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	C1orf123	Q9NWV4	160 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CNIH4	Q9P003	139 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	LHX3	Q9UBR4	397 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	GNG8	Q9UK08	70 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RAB22A	Q9UL26	194 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RNF150	Q9ULK6	438 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	KCNK6	Q9Y257	313 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	MRPS33	Q9Y291	106 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ASF1A	Q9Y294	204 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CSAG2	Q9Y5P2	127 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	MMP24	Q9Y5R2	645 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF780B	Q9Y6R6	833 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	PCSK5	Q92824	1860 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ADAMTSL1	Q8N6G6	1762 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	LCT	P09848	1927 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582		A0A0D9SEW6	157 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ANTXRL	A6NF34	631 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CDRT15L2	A8MXV6	281 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582		C9J4A7	227 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM157A	C9JC47	383 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	HSBP1L1	C9JCN9	74 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582		E5RGE8	158 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CLDN34	H7C241	214 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582		K7EPK0	472 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	OR1F1	O43749	312 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	OR10H2	O60403	315 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	TSPAN2	O60636	221 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CYTIP	O60759	359 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CLDN7	O95471	211 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FGF19	O95750	216 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC16A8	O95907	504 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CH25H	O95992	272 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	MBP	P02686	304 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CD3D	P04234	171 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	DCN	P07585	359 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ERCC1	P07992	297 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF10	P21506	573 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	NFYB	P25208	207 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ARR3	P36575	388 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	AQP2	P41181	271 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	GLIPR1	P48060	266 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	DHPS	P49366	369 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	PRLHR	P49683	370 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ATP1B3	P54709	279 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	MTCP1	P56278	107 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC35A1	P78382	337 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	MRPS6	P82932	125 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	RPL19	P84098	196 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	TAF10	Q12962	218 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FHL3	Q13643	280 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CRMP1	Q14194	572 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	RBM39	Q14498	530 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CEBPE	Q15744	281 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF674	Q2M3X9	581 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ARHGAP11B	Q3KRB8	267 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ACSF3	Q4G176	576 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	HIKESHI	Q53FT3	197 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	TRMT12	Q53H54	448 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	VAX1	Q5SQQ9	334 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	PIP5KL1	Q5T9C9	394 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	MORN5	Q5VZ52	161 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM90A2P	Q658T7	463 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CCDC144NL	Q6NUI1	221 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ULK3	Q6PHR2	472 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	UNQ6126/PRO20091	Q6UXV3	157 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC25A26	Q70HW3	274 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	DPPA4	Q7L190	304 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF550	Q7Z398	422 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	TMPRSS12	Q86WS5	348 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	GKN2	Q86XP6	184 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF573	Q86YE8	665 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	RBM45	Q8IUH3	476 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF440	Q8IYI8	595 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST3H2BB	Q8N257	126 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF614	Q8N883	585 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	C17orf47	Q8NEP4	570 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	OR4D11	Q8NGI4	311 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	OR52B4	Q8NGK2	314 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FIBIN	Q8TAL6	211 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	GLYATL1	Q969I3	302 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	NEIL2	Q969S2	332 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SEH1L	Q96EE3	360 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	ABHD14B	Q96IU4	210 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	LINC00615	Q96LM1	132 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	AMDHD1	Q96NU7	426 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	MS4A8	Q9BY19	250 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	TBL1XR1	Q9BZK7	514 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC5A7	Q9GZV3	580 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	LAT2	Q9GZY6	243 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	PLK3	Q9H4B4	646 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SPACA1	Q9HBV2	294 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	TMEM30A	Q9NV96	361 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	C2orf42	Q9NWW7	574 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms