RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SEH1LQ96EE3 360 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 ADTRPQ96IZ2 230 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 FAM210BQ96KR6 192 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 BTN2A3PQ96KV6 586 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 ATP6V1G3Q96LB4 118 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 KCNS3Q9BQ31 491 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 C20orf144Q9BQM9 153 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 COPS4Q9BT78 406 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 FGF23Q9GZV9 251 aaPredicted RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 NSRP1Q9H0G5 558 aaKnown RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PARP12Q9H0J9 701 aaKnown RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 ARV1Q9H2C2 271 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 LINC00597Q9H2U6 94 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 VCX3BQ9H321 246 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 OR52D1Q9H346 318 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 TPK1Q9H3S4 243 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 IL20Q9NYY1 176 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 CHMP5Q9NZZ3 219 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 CLEC2DQ9UHP7 191 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 NDRG2Q9UN36 371 aaKnown RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 POFUT2Q9Y2G5 429 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 HES2Q9Y543 173 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 TMEM131Q92545 1883 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 COL4A4P53420 1690 aaPredicted RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IGKV1-27A0A075B6S5 117 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IGHV3OR16-9A0A0B4J2B5 98 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IGHV5-10-1A0A0J9YXX1 117 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 GSTTP1A0A1W2PQM5 241 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 GOLGA8JA6NMD2 632 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF705GA8MUZ8 300 aaPredicted RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 KRBOX1C9JBD0 128 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 H7C2Y5 167 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 DNASE2O00115 360 aaPredicted RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 YKT6O15498 198 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 RP2O75695 350 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 DHRS3O75911 302 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC22A5O76082 557 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ADRA2AP08913 450 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 TACSTD2P09758 323 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 GOLGA8HP0CJ92 632 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 HSPD1P10809 573 aaKnown RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ADRB3P13945 408 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IGFBP3P17936 291 aaPredicted RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 GNRHRP30968 328 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 S100A5P33763 92 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 POLR2IP36954 125 aaKnown RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 GTF2A1P52655 376 aaPredicted RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 MLF1P58340 268 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 CRADDP78560 199 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IL5RAQ01344 420 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 SYCNQ0VAF6 134 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 STX3Q13277 289 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 XRCC4Q13426 336 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IRF4Q15306 451 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 SHHQ15465 462 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 CHRFAM7AQ494W8 412 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 C6orf99Q4VX62 202 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 MPV17L2Q567V2 206 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 TMEM255AQ5JRV8 349 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 FAM27D1Q5T7N8 215 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 KDM4DQ6B0I6 523 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ZFP2Q6ZN57 461 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 RTL4Q6ZR62 310 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 SPATA24Q86W54 205 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 LRRC8AQ8IWT6 810 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ST13P4Q8IZP2 240 aaPredicted RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 SELENOHQ8IZQ5 122 aaKnown RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 SYS1Q8N2H4 156 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF786Q8N393 782 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 GATSQ8NAP1 163 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 OR10G2Q8NGC3 310 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 OR1J4Q8NGS1 313 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 OR6N2Q8NGY6 317 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 CPB2Q96IY4 423 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF75AQ96N20 296 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF285Q96NJ3 590 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 NXT1Q9UKK6 140 aaKnown RBP2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 RAB23Q9ULC3 237 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 PSG11Q9UQ72 335 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF257Q9Y2Q1 563 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 TMEM94Q12767 1356 aa2.07□□□□□ -2.08
SHCBP1-202ENST00000563219 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 FAM240AA0A1B0GVK7 77 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 ERICH2A1L162 156 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 M0R1X1 148 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 RNF113AO15541 343 aaKnown RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 REM1O75628 298 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 TTC4O95801 387 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 GFAPP14136 432 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF3P17036 446 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 IL12BP29460 328 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 UCNP55089 124 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 TAS2R31P59538 309 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 C2orf80Q0P641 193 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 ST3GAL4Q11206 333 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 PRSS8Q16651 343 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 C18orf21Q32NC0 220 aaPredicted RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 TMEM236Q5W0B7 351 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 APOBEC3HQ6NTF7 200 aaKnown RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 OPN5Q6U736 354 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms