RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 RIN1Q13671 783 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
EDC3-206ENST00000563009 OR8G1Q15617 311 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 ZBTB37Q5TC79 503 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 OR2G6Q5TZ20 316 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 DOK3Q7L591 496 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 CELF2-AS1Q8N7Q2 184 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 SEMA6DQ8NFY4 1073 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 OR14K1Q8NGZ2 314 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 MYDGFQ969H8 173 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 YIPF5Q969M3 257 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 FAM71F1Q96KD3 344 aaPredicted RBP12.91□□□□□ -0.34
EDC3-206ENST00000563009 MEGF10Q96KG7 1140 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 ADAT1Q9BUB4 502 aaKnown RBP12.91□□□□□ -0.34
EDC3-206ENST00000563009 CDCA4Q9BXL8 241 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 CHODLQ9H9P2 273 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 DLL4Q9NR61 685 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 TPRKBQ9Y3C4 175 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 RHBDD3Q9Y3P4 386 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 CELSR1Q9NYQ6 3014 aa12.91□□□□□ -0.34
EDC3-206ENST00000563009 IGHV4-30-2A0A087WSY4 118 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 ZNF816-ZNF321PA0A0X1KG74 233 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 VWC2LB2RUY7 222 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 PTGES3LE9PB15 166 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 F5H5P2 479 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 LYNX1G3V0Z9 82 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 PTBP3O95758 552 aaKnown RBP12.9□□□□□ -0.34
EDC3-206ENST00000563009 LYNX1P0DP58 116 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 TNFRSF1AP19438 455 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 GATA4P43694 442 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 SRP9P49458 86 aaKnown RBP12.9□□□□□ -0.34
EDC3-206ENST00000563009 RIPPLY1Q0D2K3 151 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 MAB21L1Q13394 359 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 CCDC58Q4VC31 144 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
EDC3-206ENST00000563009 LURAP1LQ8IV03 231 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 SPERTQ8NA61 448 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 RPS4Y2Q8TD47 263 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 ITLN1Q8WWA0 313 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 SGCDQ92629 289 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 PAPOLGQ9BWT3 736 aaKnown RBP12.9□□□□□ -0.34
EDC3-206ENST00000563009 BABAM2Q9NXR7 383 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 UBAP1Q9NZ09 502 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 MPC1Q9Y5U8 109 aa12.9□□□□□ -0.34
EDC3-206ENST00000563009 A0A1B0GVI7 797 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 LOC107986453A0A1B0GWG9 222 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 SYT7O43581 403 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 CDC14BO60729 498 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 GNALP38405 381 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 TMEM33P57088 247 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 ODF4Q2M2E3 257 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 TMEM244Q5VVB8 128 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 NANOGP1Q8N7R0 232 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 DVL3Q92997 716 aaPredicted RBP12.89□□□□□ -0.35
EDC3-206ENST00000563009 ITPKCQ96DU7 683 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 PIMREGQ9BSJ6 248 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 PPP1R3EQ9H7J1 279 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 GCM1Q9NP62 436 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 ABCB9Q9NP78 766 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 ZNF275Q9NSD4 429 aaPredicted RBP12.89□□□□□ -0.35
EDC3-206ENST00000563009 PIGLQ9Y2B2 252 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 CACNG2Q9Y698 323 aa12.89□□□□□ -0.35
EDC3-206ENST00000563009 A0A096LNT2 108 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.88□□□□□ -0.35
EDC3-206ENST00000563009 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 TMEM212A6NML5 194 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 ZNF850A8MQ14 1090 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 OGG1O15527 345 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 ZFPL1O95159 310 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 LALBAP00709 142 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 RPSAP08865 295 aaKnown RBP12.88□□□□□ -0.35
EDC3-206ENST00000563009 SLC25A16P16260 332 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 FAHP16930 419 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 ZNF12P17014 697 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 NR4A2P43354 598 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 GTF2A1P52655 376 aaPredicted RBP12.88□□□□□ -0.35
EDC3-206ENST00000563009 MZT1Q08AG7 82 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 PRDX4Q13162 271 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 IRF3Q14653 427 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 CDK5R1Q15078 307 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 CARTPTQ16568 116 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 HFEQ30201 348 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 RPL22L1Q6P5R6 122 aaKnown RBP12.88□□□□□ -0.35
EDC3-206ENST00000563009 RDH10Q8IZV5 341 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 GATAD2BQ8WXI9 593 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 C10orf35Q96D05 121 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 TRIM36Q9NQ86 728 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 ERVK-18Q9QC07 812 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 ENPP5Q9UJA9 477 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 PPP1R3CQ9UQK1 317 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
EDC3-206ENST00000563009 DYSFO75923 2080 aa12.87□□□□□ -0.35
EDC3-206ENST00000563009 TRBV2A0A0J9YWF9 115 aa12.87□□□□□ -0.35
EDC3-206ENST00000563009 ANXA2P2A6NMY6 339 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms