RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 VAMP8Q9BV40 100 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 ZNF703Q9H7S9 590 aaPredicted RBP8.35□□□□□ -1.07
CDH1-205ENST00000562836 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
CDH1-205ENST00000562836 TRAV14DV4A0A0A6YYC5 116 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 FAM159BA6NKW6 160 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 H3BQ15 152 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 ESR1P03372 595 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 OR4Q2P0C623 313 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 MDKP21741 143 aaPredicted RBP8.34□□□□□ -1.07
CDH1-205ENST00000562836 AOAHP28039 575 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 NOVP48745 357 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 MVDP53602 400 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 TMEM267Q0VDI3 215 aaPredicted RBP8.34□□□□□ -1.07
CDH1-205ENST00000562836 OR1Q1Q15612 314 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 SOHLH1Q5JUK2 328 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 ZNF626Q68DY1 528 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 GTF2H5Q6ZYL4 71 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 LSRQ86X29 649 aaPredicted RBP8.34□□□□□ -1.07
CDH1-205ENST00000562836 CDRT4Q8N9R6 151 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 LRRC75AQ8NAA5 344 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 OR5B12Q96R08 314 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 FAIM2Q9BWQ8 316 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 ENTPD2Q9Y5L3 495 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 SCN9AQ15858 1988 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 SMIM9A6NGZ8 99 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 OR2T8A6NH00 312 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 H7BYZ3 331 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 TPST2O60704 377 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 PROSCO94903 275 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 FCGR3AP08637 254 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 MMP9P14780 707 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 GPX3P22352 226 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 SRD5A2P31213 254 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 MTNR1BP49286 362 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 DCAF4L1Q3SXM0 396 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 EMC4Q5J8M3 183 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 ZNF684Q5T5D7 378 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 ASCL5Q7RTU5 278 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 SUMF2Q8NBJ7 301 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 SLC38A9Q8NBW4 561 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 OR4K1Q8NGD4 311 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 ABHD4Q8TB40 342 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 THAP4Q8WY91 577 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
CDH1-205ENST00000562836 RAB9BQ9NP90 201 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 NDUFB11Q9NX14 153 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 MRPL27Q9P0M9 148 aaKnown RBP8.34□□□□□ -1.07
CDH1-205ENST00000562836 SELENOKQ9Y6D0 94 aa8.34□□□□□ -1.07
CDH1-205ENST00000562836 FAM157CP0CG43 387 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 PSMB1P20618 241 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 TAF6P49848 677 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 HSD52Q0P140 79 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 IL11RAQ14626 422 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TP53I3Q53FA7 332 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 FAM219BQ5XKK7 198 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 DOK6Q6PKX4 331 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 SLC16A11Q8NCK7 471 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TMEM106AQ96A25 262 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TM4SF19Q96DZ7 209 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 WDR34Q96EX3 536 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 DGAT2Q96PD7 388 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TMEM204Q9BSN7 226 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 C1orf43Q9BWL3 253 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 SLC39A8Q9C0K1 460 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 POLR2J2Q9GZM3 115 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TESQ9UGI8 421 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 SNED1Q8TER0 1413 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 ANKRD12Q6UB98 2062 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 GAGE12HA6NDE8 117 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 M0R129 80 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TAAR5O14804 337 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 RAMP1O60894 148 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 ABHD16AO95870 558 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 H1F0P07305 194 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 CELA3AP09093 270 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TSFMP43897 325 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 SPHARQ15513 63 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 QRICH1Q2TAL8 776 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 C1orf189Q5VU69 101 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 ABHD15Q6UXT9 468 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 FRRS1Q6ZNA5 592 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 C15orf39Q6ZRI6 1047 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 PARS2Q7L3T8 475 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 C17orf64Q86WR6 236 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 ZNF709Q8N972 641 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 MFSD8Q8NHS3 518 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 MSI2Q96DH6 328 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 TMEM134Q9H6X4 195 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 LPAR3Q9UBY5 353 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 FEZF1A0PJY2 475 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 EIF1AYO14602 144 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 ZNF207O43670 478 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 CD33P20138 364 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 OPRD1P41143 372 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 PRLHRP49683 370 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 DYNLT1P63172 113 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms