RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 NKX2-8O15522 239 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ERI3O43414 337 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 MBTPS2O43462 519 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 MPZL2O60487 215 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 WDR1O75083 606 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 EEDO75530 441 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ATG12O94817 140 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 NDUFA7O95182 113 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 RAB36O95755 333 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 CLIC3O95833 236 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 HAND1O96004 215 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 IFNA7P01567 189 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 TYMSP04818 313 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PVALBP20472 110 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 CRHBPP24387 322 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 HRH2P25021 359 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 FGF9P31371 208 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 GABRA5P31644 462 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PIGAP37287 484 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 XCR1P46094 333 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR3A4PP47883 348 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 RPS15AP62244 130 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PITX1P78337 314 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 NTHL1P78549 312 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZXDAP98168 799 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PLP2Q04941 152 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 BAXQ07812 192 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ADIGQ0VDE8 80 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 GAGE5Q13069 117 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 GAGE6Q13070 117 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF234Q14588 700 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 RBMS2Q15434 407 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 GABRA6Q16445 453 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZSWIM7Q19AV6 140 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 RPEL1Q2QD12 228 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 SCGB2B2Q4G0G5 96 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 UNC50Q53HI1 259 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ELFN2Q5R3F8 820 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PRSS48Q7RTY5 328 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 CCDC190Q86UF4 302 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PIGZQ86VD9 579 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 TMPRSS12Q86WS5 348 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 CIR1Q86X95 450 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF676Q8N7Q3 588 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF611Q8N823 705 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 BOLLQ8N9W6 283 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR5AU1Q8NGC0 362 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR52I1Q8NGK6 324 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR13G1Q8NGZ3 307 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR1F12Q8NHA8 337 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR14L1PQ8NHC6 308 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 TWIST2Q8WVJ9 160 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PEX11GQ96HA9 241 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 REEP6Q96HR9 211 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 LINC00052Q96N35 136 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 OR52E6Q96RD3 313 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 CSF3RQ99062 836 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 P2RX4Q99571 388 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 FOXB1Q99853 325 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 KCTD14Q9BQ13 255 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 CMSS1Q9BQ75 279 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 TKTL2Q9H0I9 626 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 NXF5Q9H1B4 397 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PATZ1Q9HBE1 687 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 POPDC3Q9HBV1 291 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 NOX4Q9NPH5 578 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 SLC52A3Q9NQ40 469 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 SLC2A4RGQ9NR83 387 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 SDR39U1Q9NRG7 319 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 AIG1Q9NVV5 245 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF230Q9UIE0 474 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF107Q9UII5 783 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 RALYQ9UKM9 306 aaKnown RBP4.83□□□□□ -1.64
CAPN3-211ENST00000562199 TIMM10BQ9Y5J6 103 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 A3GALT2U3KPV4 340 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 BRWD3Q6RI45 1802 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 PAPPA2Q9BXP8 1791 aa4.83□□□□□ -1.64
CAPN3-211ENST00000562199 TRBV9A0A0B4J1U6 114 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CENPVL1A0A0U1RR11 272 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CENPVL3A0A0U1RRI6 287 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 KIR2DS1A0A191URI9 304 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 A0A1W2PP18 115 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 RPS10-NUDT3A0A1W2PQS6 291 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CIB4A0PJX0 185 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TRAPPC13A5PLN9 417 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ASPDHA6ND91 283 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ANKUB1A6NFN9 424 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ARL5CA6NH57 179 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 DHRS7CA6NNS2 312 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 RNF212BA8MTL3 300 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PRSS46E5RG02 174 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FAM72CH0Y354 149 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 UPK1AO00322 258 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SLC1A7O00341 560 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 UBFD1O14562 309 aaKnown RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CCL25O15444 150 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FGF10O15520 208 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PPIHO43447 177 aaKnown RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 HCRTO43612 131 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms