RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SNAI3Q3KNW1 292 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 DRAM2Q6UX65 266 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 ZNF826PQ6ZT77 177 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 FAM90A1Q86YD7 464 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 FANK1Q8TC84 345 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 NPRL2Q8WTW4 380 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 C7orf34Q96L11 122 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 RDH12Q96NR8 316 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 CHID1Q9BWS9 393 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 OSBPL10Q9BXB5 764 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 C14orf119Q9NWQ9 140 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 MRPL22Q9NWU5 206 aaKnown RBP9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 DNAJB9Q9UBS3 223 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 CAB39Q9Y376 341 aaPredicted RBP9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 FAM96BQ9Y3D0 163 aa9.75□□□□□ -0.85
CARMIL3-204ENST00000561354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 C5orf63A6NC05 138 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 A6NLC8 198 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 BHLHE40O14503 412 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 TNFAIP8O95379 198 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 HLA-DQA2P01906 255 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 GRPP07492 148 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 LYNP07948 512 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 ZNF823P16415 610 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 NOS3P29474 1203 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 DBPQ10586 325 aaPredicted RBP9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 C2orf68Q2NKX9 166 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 GLYATL3Q5SZD4 288 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 VMO1Q7Z5L0 202 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 AMIGO2Q86SJ2 522 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 LY6G5BQ8NDX9 201 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 OR52J3Q8NH60 311 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 OR2AE1Q8NHA4 323 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 CIB1Q99828 191 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 IFT27Q9BW83 186 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 ANKRD60Q9BZ19 345 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 SEMA6AQ9H2E6 1030 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 OPA3Q9H6K4 179 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 ZNF281Q9Y2X9 895 aa9.74□□□□□ -0.85
CARMIL3-204ENST00000561354 hCG_1807616A0A1W2PRN6 198 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 BTBD17A6NE02 478 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 GPR37O15354 613 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 DIRAS1O95057 198 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 FBP1P09467 338 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 MUC1P15941 1255 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 ANOS1P23352 680 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 GRK5P34947 590 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 TGFBR2P37173 567 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 DDOSTP39656 456 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 SMIM11AP58511 58 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 GUCA2AQ02747 115 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 MICBQ29980 383 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 DHRS7BQ6IAN0 325 aaPredicted RBP9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 C1QL4Q86Z23 238 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 PDZD9Q8IXQ8 264 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 CMTM4Q8IZR5 234 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 GALNT4Q8N4A0 578 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 SDR9C7Q8NEX9 313 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 OR4C15Q8NGM1 316 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 ST8SIA4Q92187 359 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 PYURFQ96I23 114 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 DDOQ99489 341 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 FN3KQ9H479 309 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 ZNRD1Q9P1U0 126 aa9.73□□□□□ -0.85
CARMIL3-204ENST00000561354 PRKDCP78527 4128 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 IGHV3OR15-7A0A075B7D8 119 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 ZNF816-ZNF321PA0A0X1KG74 233 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 XRCC2O43543 280 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 GADD45GO95257 159 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 EEF1B2P24534 225 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 MAGEA2P43356 314 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 GSSP48637 474 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 POU4F2Q12837 409 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 FBLN7Q53RD9 439 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 SLC36A1Q7Z2H8 476 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 ZDHHC13Q8IUH4 622 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 C11orf53Q8IXP5 236 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 CBR4Q8N4T8 237 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 FAM86B1Q8N7N1 296 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 OR2T4Q8NH00 348 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 FAM110DQ8TAY7 271 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 SPSB4Q96A44 273 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 C12orf43Q96C57 262 aaKnown RBP9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 KCNJ15Q99712 375 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 FAM192AQ9GZU8 254 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 SMPD3Q9NY59 655 aaPredicted RBP9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 OAZ3Q9UMX2 235 aa9.72□□□□□ -0.85
CARMIL3-204ENST00000561354 A6NHS1 94 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 SAC3D1A6NKF1 404 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 ANKRD30BLA7E2S9 258 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 H0YAE9 185 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 CST1P01037 141 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 SEMG1P04279 462 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 CSF1P09603 554 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 PYCR1P32322 319 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 IFNGR2P38484 337 aa9.71□□□□□ -0.86
CARMIL3-204ENST00000561354 RPS27P42677 84 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms