RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LSM2Q9Y333 95 aaKnown RBP18.4■□□□□ 0.54
SNX1-206ENST00000559389 RHBDD3Q9Y3P4 386 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 TRBV2A0A0J9YWF9 115 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 ZNF816-ZNF321PA0A0X1KG74 233 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 TPD52L2O43399 206 aaKnown RBP18.39■□□□□ 0.53
SNX1-206ENST00000559389 GMDSO60547 372 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 DAOP14920 347 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 FAHP16930 419 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 EEF1B2P24534 225 aaKnown RBP18.39■□□□□ 0.53
SNX1-206ENST00000559389 GNALP38405 381 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 TAS2R43P59537 309 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 RIPPLY1Q0D2K3 151 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 OR8G1Q15617 311 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 SPRNQ5BIV9 151 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 DNM1P46Q6ZS02 220 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 RDH10Q8IZV5 341 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 ZNF525Q8N782 197 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 ZNF676Q8N7Q3 588 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 DVL3Q92997 716 aaPredicted RBP18.39■□□□□ 0.53
SNX1-206ENST00000559389 SMIM19Q96E16 107 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 OR2V2Q96R30 315 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 CCDC90BQ9GZT6 254 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 EGLN1Q9GZT9 426 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 COMMD4Q9H0A8 199 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 DECR2Q9NUI1 292 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 IL19Q9UHD0 177 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 SIRT4Q9Y6E7 314 aaPredicted RBP18.39■□□□□ 0.53
SNX1-206ENST00000559389 TANC2Q9HCD6 1990 aa18.39■□□□□ 0.53
SNX1-206ENST00000559389 PRRC2AP48634 2157 aaKnown RBP18.38■□□□□ 0.53
SNX1-206ENST00000559389 TACC2O95359 2948 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 F5H5P2 479 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 OGG1O15527 345 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 MRPS14O60783 128 aaKnown RBP18.38■□□□□ 0.53
SNX1-206ENST00000559389 CSF3P09919 207 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 MRPS11P82912 194 aaKnown RBP18.38■□□□□ 0.53
SNX1-206ENST00000559389 PRDX4Q13162 271 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 TBCEQ15813 527 aaPredicted RBP18.38■□□□□ 0.53
SNX1-206ENST00000559389 OR10AC1Q8NH08 325 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 OR5AK2Q8NH90 309 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 UBASH3BQ8TF42 649 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 ITLN1Q8WWA0 313 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 MEGF10Q96KG7 1140 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 OR5M11Q96RB7 305 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 PDCD1LG2Q9BQ51 273 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 PPP1R3EQ9H7J1 279 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 ABCB9Q9NP78 766 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 ENPP5Q9UJA9 477 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 HHLA2Q9UM44 414 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 PIGLQ9Y2B2 252 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 LRCH1Q9Y2L9 728 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 MPC1Q9Y5U8 109 aa18.38■□□□□ 0.53
SNX1-206ENST00000559389 CHD3Q12873 2000 aaKnown RBP18.38■□□□□ 0.53
SNX1-206ENST00000559389 H3BSH0 61 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 ZNF12P17014 697 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 CD200P41217 278 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 BDH1Q02338 343 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 ACSM1Q08AH1 577 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 SPHARQ15513 63 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 KCTD21Q4G0X4 260 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 TMEM42Q69YG0 159 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 DMKNQ6E0U4 476 aaPredicted RBP18.37■□□□□ 0.53
SNX1-206ENST00000559389 CELF2-AS1Q8N7Q2 184 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 ZFP41Q8N8Y5 198 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 RGP1Q92546 391 aaPredicted RBP18.37■□□□□ 0.53
SNX1-206ENST00000559389 RDH5Q92781 318 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 PLEKHA1Q9HB21 404 aa18.37■□□□□ 0.53
SNX1-206ENST00000559389 IGHV1-69-2A0A0G2JMI3 117 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.36■□□□□ 0.53
SNX1-206ENST00000559389 TRIM64A6NGJ6 449 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 LMX1BO60663 402 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 RP2O75695 350 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 PTBP3O95758 552 aaKnown RBP18.36■□□□□ 0.53
SNX1-206ENST00000559389 RPSAP08865 295 aaKnown RBP18.36■□□□□ 0.53
SNX1-206ENST00000559389 TNFRSF1AP19438 455 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 SRP9P49458 86 aaKnown RBP18.36■□□□□ 0.53
SNX1-206ENST00000559389 MAB21L1Q13394 359 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 CLEC12BQ2HXU8 276 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 CLEC2AQ6UVW9 174 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 ZDHHC23Q8IYP9 409 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 SPERTQ8NA61 448 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 OR51A4Q8NGJ6 313 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 HPSE2Q8WWQ2 592 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 PIGCQ92535 297 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 YIPF5Q969M3 257 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 C10orf35Q96D05 121 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 ITPKCQ96DU7 683 aa18.36■□□□□ 0.53
SNX1-206ENST00000559389 ANXA2P2A6NMY6 339 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 ZNF850A8MQ14 1090 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 CRYBB2P43320 205 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 GATA4P43694 442 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 MAP2K4P45985 399 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 PDLIM4P50479 330 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 MED22Q15528 200 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 WFDC11Q8NEX6 87 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 OR8S1Q8NH09 359 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 PGLYRP3Q96LB9 341 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 CACNG2Q9Y698 323 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 NOTCH2Q04721 2471 aa18.35■□□□□ 0.53
SNX1-206ENST00000559389 LYNX1G3V0Z9 82 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 CDC14BO60729 498 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms