RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ZNF319Q9P2F9 582 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 RNF7Q9UBF6 113 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 NUFIP1Q9UHK0 495 aaKnown RBP7.14□□□□□ -1.27
TPM1-213ENST00000558400 KLHDC2Q9Y2U9 406 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 GMPPBQ9Y5P6 360 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 SNX5Q9Y5X3 404 aa7.14□□□□□ -1.27
TPM1-213ENST00000558400 TRAV38-1A0A0B4J264 116 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 A0A0G2JMP0 313 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 A0A0X1KG70 313 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 LOC100130705A0A1B0GUX0 176 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 C5orf63A6NC05 138 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 METTL15A6NJ78 407 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 FAM157AC9JC47 383 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 E9PQ18 207 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 LOC110117498-PIK3R3F6TDL0 507 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 J3QLI3 93 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 SLC16A6O15403 523 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 PLPP2O43688 288 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 SRD5A1P18405 259 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 CFHR2P36980 270 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 ACTC1P68032 377 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 ACTA1P68133 377 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 RIPPLY1Q0D2K3 151 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 GFOD2Q3B7J2 385 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 FAHD2BQ6P2I3 314 aaPredicted RBP7.13□□□□□ -1.27
TPM1-213ENST00000558400 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 THAP5Q7Z6K1 395 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 PHC2Q8IXK0 858 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 ELMOD2Q8IZ81 293 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 CCDC54Q8NEL0 328 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 ZNF555Q8NEP9 628 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 OR4M2Q8NGB6 313 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 OR8B12Q8NGG6 310 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 RHOXF1Q8NHV9 184 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 ZNF420Q8TAQ5 688 aaPredicted RBP7.13□□□□□ -1.27
TPM1-213ENST00000558400 FAHD2AQ96GK7 314 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 SLC29A1Q99808 456 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 APOL4Q9BPW4 351 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 RTL8AQ9BWD3 113 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 PAPOLGQ9BWT3 736 aaKnown RBP7.13□□□□□ -1.27
TPM1-213ENST00000558400 FAM118AQ9NWS6 357 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 FAM206AQ9NX38 181 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 COPS3Q9UNS2 423 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 POLR3KQ9Y2Y1 108 aaPredicted RBP7.13□□□□□ -1.27
TPM1-213ENST00000558400 R4GMQ9 66 aa7.13□□□□□ -1.27
TPM1-213ENST00000558400 SONP18583 2426 aaKnown RBP7.13□□□□□ -1.27
TPM1-213ENST00000558400 DYSFO75923 2080 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 ZNF816-ZNF321PA0A0X1KG74 233 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 A0A1W2PQL4 384 aaPredicted RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 A6NLC8 198 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 TMEM210A6NLX4 147 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 DHRS7CA6NNS2 312 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 RNF212BA8MTL3 300 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 M0R129 80 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 PSMD9O00233 223 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 FAM20BO75063 409 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 FADS2O95864 444 aaKnown RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 CYB5R3P00387 301 aaPredicted RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 GRPP07492 148 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 RPSAP08865 295 aaKnown RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 WNT2P09544 360 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 SRP14P37108 136 aaKnown RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 PMELP40967 661 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 ZMYND11Q15326 602 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 MPPED2Q15777 294 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 C11orf91Q3C1V1 193 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 KLHL22Q53GT1 634 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 ESCO2Q56NI9 601 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 FAM76BQ5HYJ3 339 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 LIPNQ5VXI9 398 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 TTC23Q5W5X9 447 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 DCDC5Q6ZRR9 648 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 FAM220AQ7Z4H9 259 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 COMMD2Q86X83 199 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 ACBD7Q8N6N7 88 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 PACRGLQ8N7B6 248 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 YIPF7Q8N8F6 280 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 SEMA6DQ8NFY4 1073 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 OR10H4Q8NGA5 316 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 OR5A2Q8NGI9 324 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 PIGCQ92535 297 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 UBE2FQ969M7 185 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 ADI1Q9BV57 179 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 UFSP2Q9NUQ7 469 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 SMPD3Q9NY59 655 aaPredicted RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 MRM2Q9UI43 246 aaKnown RBP7.12□□□□□ -1.27
TPM1-213ENST00000558400 OR52A1Q9UKL2 312 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 LRCH1Q9Y2L9 728 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 RHBDD3Q9Y3P4 386 aa7.12□□□□□ -1.27
TPM1-213ENST00000558400 MALRD1Q5VYJ5 2156 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 hCG_1807616A0A1W2PRN6 198 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 DAPL1A0PJW8 107 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 ZNF850A8MQ14 1090 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 CEACAM18A8MTB9 384 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 LGALS8O00214 317 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 ENTPD6O75354 484 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 DHRS3O75911 302 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 PNPP00491 289 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 LHBP01229 141 aa7.11□□□□□ -1.27
TPM1-213ENST00000558400 IGLV3-1P01715 115 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms