RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 SURF2Q15527 256 aaPredicted RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 CSRP2Q16527 193 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 PLEKHN1Q494U1 663 aaPredicted RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 NHLRC3Q5JS37 347 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ATPAF1Q5TC12 328 aaPredicted RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 PRAMEF20Q5VT98 475 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CARD17Q5XLA6 110 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 FAAP20Q6NZ36 180 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TMUB2Q71RG4 321 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 FAM57BQ71RH2 274 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 GLRX5Q86SX6 157 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 WDFY1Q8IWB7 410 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ZNF100Q8IYN0 542 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR5AS1Q8N127 324 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 GPR137CQ8N3F9 429 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ACBD4Q8NC06 268 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR4D10Q8NGI6 311 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR5M8Q8NGP6 311 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR13C9Q8NGT0 318 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR6K3Q8NGY3 331 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TERB2Q8NHR7 220 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 SCARB1Q8WTV0 552 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 MITD1Q8WV92 249 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ELMOD3Q96FG2 381 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 GNRHR2Q96P88 292 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 IP6K3Q96PC2 410 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 S100A13Q99584 98 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ZNF416Q9BWM5 594 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TM2D1Q9BX74 207 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TMEM59Q9BXS4 323 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ULBP2Q9BZM5 246 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 LPAR5Q9H1C0 372 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 NARFLQ9H6Q4 476 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TMEM185BQ9H7F4 350 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CA10Q9NS85 328 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 ABI3Q9P2A4 366 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 KLK13Q9UKR3 277 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TCFL5Q9UL49 500 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 BOKQ9UMX3 212 aaPredicted RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 EDARQ9UNE0 448 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 FARSAQ9Y285 508 aaKnown RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 CEP290O15078 2479 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 EML5Q05BV3 1969 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TP53BP1Q12888 1972 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 PRSS44E7EML9 344 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 H3BSH0 61 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 NDUFA2O43678 99 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 LMX1BO60663 402 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 STK17BO94768 372 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TOXO94900 526 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 MPC2O95563 127 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 DUS4LO95620 317 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 RRASP10301 218 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 ZNF35P13682 527 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 HIST1H1DP16402 221 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 MGMTP16455 207 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 CPT2P23786 658 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 ZBTB25P24278 435 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 CDAP32320 146 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 CYB561P49447 251 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 H2BFSP57053 126 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 B3GALT5-AS1P59052 145 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 RPS27AP62979 156 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 UBA52P62987 128 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 DHRS2Q13268 280 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 MFAP5Q13361 173 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 HLXQ14774 488 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 KISS1Q15726 138 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 ACER2Q5QJU3 275 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 OTPQ5XKR4 325 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 PPP1R32Q7Z5V6 425 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 HOGA1Q86XE5 327 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 GALNT16Q8N428 558 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 ZIC4Q8N9L1 334 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TMEM185AQ8NFB2 350 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 OR5M1Q8NGP8 315 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 OR13C8Q8NGS7 320 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 OR4K15Q8NH41 348 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 OR2V1Q8NHB1 315 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 OR14L1PQ8NHC6 308 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 HAS2Q92819 552 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 CPNE4Q96A23 557 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 NABP1Q96AH0 204 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TMEM45BQ96B21 275 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 MRPS24Q96EL2 167 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 PHYHIPLQ96FC7 376 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 LIN37Q96GY3 246 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 FAM71F1Q96KD3 344 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 GUCD1Q96NT3 240 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 GPER1Q99527 375 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 MDFIQ99750 246 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 SLC6A7Q99884 636 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 GAL3ST1Q99999 423 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 MESP1Q9BRJ9 268 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 RBM24Q9BX46 236 aaKnown RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 SELENOIQ9C0D9 397 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 TINAGL1Q9GZM7 467 aaPredicted RBP7.31□□□□□ -1.24
SPG11-209ENST00000558253 CHST5Q9GZS9 411 aa7.31□□□□□ -1.24
SPG11-209ENST00000558253 AKIRIN1Q9H9L7 192 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms