RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 NTNG2Q96CW9 530 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 MS4A6EQ96DS6 147 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 C4orf45Q96LM5 186 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 GPR61Q9BZJ8 451 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 ACTR3CQ9C0K3 210 aaPredicted RBP9.69□□□□□ -0.86
USP3-206ENST00000558157 AICDAQ9GZX7 198 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 ARV1Q9H2C2 271 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 SMOC1Q9H4F8 434 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 R4GN57 208 aa9.69□□□□□ -0.86
USP3-206ENST00000558157 CENPVL1A0A0U1RR11 272 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 TMEM269A0A1B0GVZ9 245 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 A0A1B0GWA3 101 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 ERI3O43414 337 aaKnown RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 LDB3O75112 727 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 SFT2D2O95562 160 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 LMO1P25800 156 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 RPL4P36578 427 aaKnown RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 PRPS1P60891 318 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 SOHLH1Q5JUK2 328 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 FIGLAQ6QHK4 219 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 LRRC25Q8N386 305 aaPredicted RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 MFSD9Q8NBP5 474 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 SAP25Q8TEE9 199 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 PACRGQ96M98 296 aaPredicted RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 MACROD1Q9BQ69 325 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 NUDT16L1Q9BRJ7 211 aaKnown RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 SLC26A1Q9H2B4 701 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 MKKSQ9NPJ1 570 aaPredicted RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 AMDHD2Q9Y303 409 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 C9J4A7 227 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 TNFSF14O43557 240 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 GALR2O43603 387 aaPredicted RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 CTSVO60911 334 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 CSN2P05814 226 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 SFTPBP07988 381 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 IL2RGP31785 369 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 THBS4P35443 961 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 ACY1Q03154 408 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 EIF2B1Q14232 305 aaKnown RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 ELOBQ15370 118 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 EXOSC6Q5RKV6 272 aaKnown RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 DCST2Q5T1A1 773 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 ZNF385CQ66K41 422 aaPredicted RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 SLC23A3Q6PIS1 610 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 TMPPEQ6ZT21 453 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 MED25Q71SY5 747 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 MRPL52Q86TS9 123 aaKnown RBP9.68□□□□□ -0.86
USP3-206ENST00000558157 POC1AQ8NBT0 407 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 NUDT9Q9BW91 350 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 LRIT1Q9P2V4 623 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 LAMP5Q9UJQ1 280 aa9.68□□□□□ -0.86
USP3-206ENST00000558157 NUP210LQ5VU65 1888 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 A0A087WV48 116 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 LINC00614P0C842 121 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 RPS15AP62244 130 aaKnown RBP9.67□□□□□ -0.86
USP3-206ENST00000558157 SLC10A1Q14973 349 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 ALG10BQ5I7T1 473 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 TRAPPC6BQ86SZ2 158 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 ZNF615Q8N8J6 731 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 OR4S1Q8NGB4 309 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 OR51A4Q8NGJ6 313 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 BAHD1Q8TBE0 780 aaPredicted RBP9.67□□□□□ -0.86
USP3-206ENST00000558157 GRHL3Q8TE85 626 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 C5orf34Q96MH7 638 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 GNRHR2Q96P88 292 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 LMF1Q96S06 567 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 ARRDC1-AS1Q9H2J1 176 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 WDR76Q9H967 626 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 IKZF2Q9UKS7 526 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 TMEM235A6NFC5 223 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 C4orf51C9J302 202 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 NGFRP08138 427 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 FABP4P15090 132 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 GRPRP30550 384 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 CCKBRP32239 447 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 MPLP40238 635 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 GFERP55789 205 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 OR1D5P58170 312 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 RAB32Q13637 225 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 ZNF260Q3ZCT1 412 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 RPUSD3Q6P087 351 aaKnown RBP9.67□□□□□ -0.86
USP3-206ENST00000558157 VN1R4Q7Z5H5 301 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 FJX1Q86VR8 437 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 PRSS35Q8N3Z0 413 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 SUMF2Q8NBJ7 301 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 OR10AC1Q8NH08 325 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 DDA1Q9BW61 102 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 SUCNR1Q9BXA5 334 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 VSX1Q9NZR4 365 aaPredicted RBP9.67□□□□□ -0.86
USP3-206ENST00000558157 FLRT3Q9NZU0 649 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 PITPNC1Q9UKF7 332 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 CABIN1Q9Y6J0 2220 aa9.67□□□□□ -0.86
USP3-206ENST00000558157 ARID1BQ8NFD5 2236 aaPredicted RBP9.67□□□□□ -0.86
USP3-206ENST00000558157 MYO15AQ9UKN7 3530 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 K7EPK0 472 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 CER1O95813 267 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms