RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 KAAG1Q9UBP8 84 aa11.74□□□□□ -0.53
SNX6-210ENST00000557341 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 AQP12BA6NM10 295 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 ANXA2P2A6NMY6 339 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 GNGT2O14610 69 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 PRODHO43272 600 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
SNX6-210ENST00000557341 T-ENOLP0DO92 83 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
SNX6-210ENST00000557341 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
SNX6-210ENST00000557341 POU1F1P28069 291 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 GSK3AP49840 483 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 CSNK2BP67870 215 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 IL5RAQ01344 420 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 PDCD1Q15116 288 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 Q6YL49 198 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 BTN2A1Q7KYR7 527 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.73□□□□□ -0.53
SNX6-210ENST00000557341 AQP12AQ8IXF9 295 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 OTOSQ8NHW6 89 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 TMIGD2Q96BF3 282 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 CLPTM1LQ96KA5 538 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 SIRPDQ9H106 197 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 ZNF556Q9HAH1 456 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 ABCB9Q9NP78 766 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 ACOXLQ9NUZ1 547 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 TAS2R1Q9NYW7 299 aa11.73□□□□□ -0.53
SNX6-210ENST00000557341 PDP1Q9P0J1 537 aaPredicted RBP11.73□□□□□ -0.53
SNX6-210ENST00000557341 CENPVL3A0A0U1RRI6 287 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 ACOT8O14734 319 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 SELENOFO60613 162 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 E2F6O75461 281 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 FCN3O75636 299 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 MELTFP08582 738 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 MDKP21741 143 aaPredicted RBP11.72□□□□□ -0.53
SNX6-210ENST00000557341 NAA10P41227 235 aaPredicted RBP11.72□□□□□ -0.53
SNX6-210ENST00000557341 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
SNX6-210ENST00000557341 POU4F2Q12837 409 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 WDR38Q5JTN6 314 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 PLBD1Q6P4A8 553 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 TMEM86BQ8N661 226 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 THEM6Q8WUY1 208 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 CANT1Q8WVQ1 401 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 TAF15Q92804 592 aaKnown RBP eCLIP11.72□□□□□ -0.534e-6■■□□□ 11.5
SNX6-210ENST00000557341 LHX4Q969G2 390 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 C12orf43Q96C57 262 aaKnown RBP11.72□□□□□ -0.53
SNX6-210ENST00000557341 ITPKCQ96DU7 683 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 FAM71F1Q96KD3 344 aaPredicted RBP11.72□□□□□ -0.53
SNX6-210ENST00000557341 MICU1Q9BPX6 476 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 THTPAQ9BU02 230 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 RTL8AQ9BWD3 113 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 SLITRK2Q9H156 845 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 TNFRSF19Q9NS68 423 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 ZNF319Q9P2F9 582 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 RPUSD1Q9UJJ7 312 aaKnown RBP11.72□□□□□ -0.53
SNX6-210ENST00000557341 ZNF391Q9UJN7 358 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 RHBDD3Q9Y3P4 386 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 MPC1Q9Y5U8 109 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 POMT1Q9Y6A1 747 aa11.72□□□□□ -0.53
SNX6-210ENST00000557341 IGHV1-69DA0A0B4J2H0 117 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 TMEM210A6NLX4 147 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.71□□□□□ -0.53
SNX6-210ENST00000557341 IGHV1-69P01742 117 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 HMGN1P05114 100 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 CRYBA1P05813 215 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 OSMP13725 252 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 OMGP23515 440 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 GINS1Q14691 196 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 SLC35D3Q5M8T2 416 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 FIP1L1Q6UN15 594 aaKnown RBP11.71□□□□□ -0.53
SNX6-210ENST00000557341 TMEM179BQ7Z7N9 219 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 GALNT4Q8N4A0 578 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 OR4F5Q8NH21 305 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 SSMEM1Q8WWF3 244 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 PPP1R3EQ9H7J1 279 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 KPTNQ9Y664 436 aa11.71□□□□□ -0.53
SNX6-210ENST00000557341 A0A1B0GUS0 222 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 A0A1B0GVI7 797 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 A0A1B0GW55 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 CDIPTO14735 213 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L2P0CJ85 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L3P0CJ86 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L4P0CJ87 422 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L5P0CJ88 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L6P0CJ89 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L7P0CJ90 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 ACKR3P25106 362 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 RAG2P55895 527 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
SNX6-210ENST00000557341 RPS7P62081 194 aaKnown RBP11.7□□□□□ -0.54
SNX6-210ENST00000557341 ARF6P62330 175 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms