RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 WDR86Q86TI4 376 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 GCSAMQ8N6F7 178 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 TCEANCQ8N8B7 351 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 OR1M1Q8NGA1 313 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 LRRC29Q8WV35 223 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 LRTOMTQ8WZ04 291 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 CNN2Q99439 309 aaKnown RBP15.34■□□□□ 0.05
NEDD1-208ENST00000555806 MICU1Q9BPX6 476 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 MROQ9BYG7 248 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 GABARAPL1Q9H0R8 117 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 PPP1R3EQ9H7J1 279 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 H2AFY2Q9P0M6 372 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-208ENST00000555806 CTSZQ9UBR2 303 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 ZNF69Q9UC07 566 aa15.34■□□□□ 0.05
NEDD1-208ENST00000555806 IGHV3OR15-7A0A075B7D8 119 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 IGHV3OR16-10A0A075B7F0 116 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 KIR2DS1A0A191URI9 304 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 NDUFA2O43678 99 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 EGR1P18146 543 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 ACKR3P25106 362 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 NPY4RP50391 375 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 CSNK2BP67870 215 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 IL5RAQ01344 420 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 KDM4DQ6B0I6 523 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 C12orf54Q6X4T0 127 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 BCDIN3DQ7Z5W3 292 aaKnown RBP15.33■□□□□ 0.04
NEDD1-208ENST00000555806 SIGLECL1Q8N7X8 197 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 FAM81AQ8TBF8 368 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 LYZL4Q96KX0 146 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 RTL8AQ9BWD3 113 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 MS4A7Q9GZW8 240 aaPredicted RBP15.33■□□□□ 0.04
NEDD1-208ENST00000555806 ENOPH1Q9UHY7 261 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 ZNF391Q9UJN7 358 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 IKZF2Q9UKS7 526 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 MPC1Q9Y5U8 109 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 TMEM14AQ9Y6G1 99 aa15.33■□□□□ 0.04
NEDD1-208ENST00000555806 TRAV40A0A0B4J280 105 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 TMEM269A0A1B0GVZ9 245 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ZAR1LA6NP61 321 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ZNF850A8MQ14 1090 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ENSAO43768 121 aaKnown RBP15.32■□□□□ 0.04
NEDD1-208ENST00000555806 EPHA2P29317 976 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 POU4F2Q12837 409 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 PRDX4Q13162 271 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 DEGS2Q6QHC5 323 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 KCTD8Q6ZWB6 473 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 MEPCEQ7L2J0 689 aaKnown RBP15.32■□□□□ 0.04
NEDD1-208ENST00000555806 COMMD2Q86X83 199 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 FAM90A1Q86YD7 464 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 C11orf53Q8IXP5 236 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 BCL6BQ8N143 479 aaPredicted RBP15.32■□□□□ 0.04
NEDD1-208ENST00000555806 TMEM163Q8TC26 289 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 FAM216AQ8WUB2 273 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ASB17Q8WXJ9 295 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 PIGCQ92535 297 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 DACT3Q96B18 629 aaPredicted RBP15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ITPKCQ96DU7 683 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 DUS3LQ96G46 650 aaKnown RBP15.32■□□□□ 0.04
NEDD1-208ENST00000555806 IL4I1Q96RQ9 567 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 SEMA6AQ9H2E6 1030 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 RNPEPL1Q9HAU8 725 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ABCB9Q9NP78 766 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 ESM1Q9NQ30 184 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 COPS3Q9UNS2 423 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 DOCK11Q5JSL3 2073 aa15.32■□□□□ 0.04
NEDD1-208ENST00000555806 FBN3Q75N90 2809 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 SLC22A31A6NKX4 558 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 C22orf46C9J442 243 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 LHBP01229 141 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 PPIAL4GP0DN37 164 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 IGHV4-38-2P0DP08 117 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 RIDAP52758 137 aaKnown RBP15.31■□□□□ 0.04
NEDD1-208ENST00000555806 MICBQ29980 383 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 ZNF829Q3KNS6 432 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-208ENST00000555806 NXNL2Q5VZ03 156 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 TEX36Q5VZQ5 186 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 CD276Q5ZPR3 534 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 C12orf73Q69YU5 71 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 WDR82Q6UXN9 313 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 ZDHHC23Q8IYP9 409 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 GALNT4Q8N4A0 578 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 ZDHHC22Q8N966 263 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 GCDHQ92947 438 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-208ENST00000555806 UPRTQ96BW1 309 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 OR8B4Q96RC9 309 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 FAM206AQ9NX38 181 aa15.31■□□□□ 0.04
NEDD1-208ENST00000555806 ACOD1A6NK06 481 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 PRR32B1ATL7 298 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 CDIPTO14735 213 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 ZNF254O75437 659 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 CST4P01036 141 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 MAP2K3P46734 347 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 FGF12P61328 243 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 UBA52P62987 128 aaKnown RBP15.3■□□□□ 0.04
NEDD1-208ENST00000555806 ANK2Q01484 3957 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 DOK3Q7L591 496 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 GID4Q8IVV7 300 aa15.3■□□□□ 0.04
NEDD1-208ENST00000555806 SLC35F2Q8IXU6 374 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms