RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ZNF680Q8NEM1 530 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 GPX8Q8TED1 209 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 ABHD3Q8WU67 409 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 CPNE4Q96A23 557 aaPredicted RBP15.22■□□□□ 0.03
SHOX-204ENST00000554971 SLC25A44Q96H78 314 aaPredicted RBP15.22■□□□□ 0.03
SHOX-204ENST00000554971 METTL17Q9H7H0 456 aaPredicted RBP15.22■□□□□ 0.03
SHOX-204ENST00000554971 RNF122Q9H9V4 155 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 G6PC2Q9NQR9 355 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 UPB1Q9UBR1 384 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 ZNF175Q9Y473 711 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 HECTD1Q9ULT8 2610 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 TRAV18A0A075B6X5 111 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 LINC00862A6NCI5 91 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 SLC22A5O76082 557 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 TMIGD3P0DMS9 266 aaPredicted RBP15.21■□□□□ 0.03
SHOX-204ENST00000554971 HLA-DOBP13765 273 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 RAB6AP20340 208 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 MFGE8Q08431 387 aaPredicted RBP15.21■□□□□ 0.03
SHOX-204ENST00000554971 ODF4Q2M2E3 257 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 LGALSLQ3ZCW2 172 aaPredicted RBP15.21■□□□□ 0.03
SHOX-204ENST00000554971 Q6ZTK2 550 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 GCNT2Q8N0V5 402 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 ANGPTL6Q8NI99 470 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 WNT2BQ93097 391 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 MARVELD3Q96A59 401 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 HEXA-AS1Q9H8Q6 139 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 GTF2A1LQ9UNN4 478 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 BAHCC1Q9P281 2608 aa15.21■□□□□ 0.03
SHOX-204ENST00000554971 A0A0G2JNJ9 132 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 TMEM272A0A1B0GTI8 110 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 TMEM269A0A1B0GVZ9 245 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 RGS11O94810 467 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 LPLP06858 475 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 CEACAM8P31997 349 aaPredicted RBP15.21■□□□□ 0.02
SHOX-204ENST00000554971 TIMP3P35625 211 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 RAD52P43351 418 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 TAS2R19P59542 299 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 CSNK2A1P68400 391 aaPredicted RBP15.21■□□□□ 0.02
SHOX-204ENST00000554971 FOXF2Q12947 444 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 PDSS1Q5T2R2 415 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 ASPHD2Q6ICH7 369 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 RAB12Q6IQ22 244 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 NHLRC1Q6VVB1 395 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 CHMP1BQ7LBR1 199 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 DCXRQ7Z4W1 244 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 TMEM229BQ8NBD8 167 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 OR13C3Q8NGS6 347 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 MS4A3Q96HJ5 214 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 Q9UFV3 132 aa15.21■□□□□ 0.02
SHOX-204ENST00000554971 PRR14LQ5THK1 2151 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 TUBAL3A6NHL2 446 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 LDLRAD4O15165 306 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 SCGNO76038 276 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 H2BFMP0C1H6 154 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 PSMA6P60900 246 aaKnown RBP15.2■□□□□ 0.02
SHOX-204ENST00000554971 POU3F1Q03052 451 aaPredicted RBP15.2■□□□□ 0.02
SHOX-204ENST00000554971 GUSBP1Q15486 140 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 CDSNQ15517 529 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 MPPED2Q15777 294 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 ESCO2Q56NI9 601 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 SLC36A1Q7Z2H8 476 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 OR10H5Q8NGA6 315 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 OR4C16Q8NGL9 310 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 SLC25A21Q9BQT8 299 aaPredicted RBP15.2■□□□□ 0.02
SHOX-204ENST00000554971 MRPL13Q9BYD1 178 aaKnown RBP15.2■□□□□ 0.02
SHOX-204ENST00000554971 ATG5Q9H1Y0 275 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 MGAT4CQ9UBM8 478 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 EIF3KQ9UBQ5 218 aaKnown RBP15.2■□□□□ 0.02
SHOX-204ENST00000554971 MCTS1Q9ULC4 181 aaKnown RBP15.2■□□□□ 0.02
SHOX-204ENST00000554971 EMC9Q9Y3B6 208 aa15.2■□□□□ 0.02
SHOX-204ENST00000554971 LOC102725191A0A1B0GVB3 256 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 DNPH1O43598 174 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 WNT11O96014 354 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 OR3A3P47888 321 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 SELENOPP49908 381 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 EFNB2P52799 333 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 GLYATL3Q5SZD4 288 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 ABLIM2Q6H8Q1 611 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 LRFN4Q6PJG9 635 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 MOB1AQ9H8S9 216 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 BEX1Q9HBH7 125 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 MYOZ1Q9NP98 299 aaPredicted RBP15.19■□□□□ 0.02
SHOX-204ENST00000554971 TAS2R4Q9NYW5 299 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 ZNF69Q9UC07 566 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 SLC5A6Q9Y289 635 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 LOC107986453A0A1B0GWG9 222 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 CLEC18AA5D8T8 446 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 DOK2O60496 412 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 ZG16O60844 167 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 GTF2F2P13984 249 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 HSD11B1P28845 292 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 SLC35A1P78382 337 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 KLHL24Q6TFL4 600 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 CLEC18BQ6UXF7 455 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.19■□□□□ 0.02
SHOX-204ENST00000554971 LYPD6Q86Y78 171 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 CLEC18CQ8NCF0 446 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 CCDC107Q8WV48 283 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 INTS12Q96CB8 462 aaKnown RBP15.19■□□□□ 0.02
SHOX-204ENST00000554971 FOXN4Q96NZ1 517 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms