RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR4K3Q96R72 315 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 SIKE1Q9BRV8 207 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 BEX2Q9BXY8 128 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 ARV1Q9H2C2 271 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 OPN4Q9UHM6 478 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF835Q9Y2P0 537 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 OR51B2Q9Y5P1 312 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 SYNRGQ9UMZ2 1314 aa1.84□□□□□ -2.12
SCFD1-213ENST00000554776 IGKV2-28A0A075B6P5 120 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 IGHV3-72A0A0B4J1Y9 119 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 CHMP2AO43633 222 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 SNAI1O95863 264 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 CCNE2O96020 404 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 IGKV2D-28P01615 120 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 MT-ND4P03905 459 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 MUC1P15941 1255 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 HOXB8P17481 243 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 ME2P23368 584 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 IVDP26440 423 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 GALR1P47211 349 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 CXCL12P48061 93 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 CMC4P56277 68 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 SLC35B1P78383 322 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 PITPNAQ00169 270 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 CDC20Q12834 499 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 PNOCQ13519 176 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 EIF4EBP1Q13541 118 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 MOBPQ13875 183 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 DMC1Q14565 340 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 ATP6V1FQ16864 119 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 SLC25A35Q3KQZ1 300 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 EPGNQ6UW88 154 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 UBALD2Q8IYN6 164 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 ZNF709Q8N972 641 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 NECAP1Q8NC96 275 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 C19orf18Q8NEA5 215 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 OR51A7Q8NH64 312 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 LINC01560Q8TB33 94 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 DCAKDQ8WVC6 231 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 ING5Q8WYH8 240 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 FAM131CQ96AQ9 280 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 CENPNQ96H22 339 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 FAM19A4Q96LR4 140 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 RNF5Q99942 180 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 KCNS3Q9BQ31 491 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 UTP23Q9BRU9 249 aaKnown RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 TMEM175Q9BSA9 504 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 TIMM29Q9BSF4 260 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 RSG1Q9BU20 258 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 PRRG3Q9BZD7 231 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 NECAP2Q9NVZ3 263 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 NDRG2Q9UN36 371 aaKnown RBP1.83□□□□□ -2.12
SCFD1-213ENST00000554776 SIGLEC7Q9Y286 467 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 KLF12Q9Y4X4 402 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 HES2Q9Y543 173 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 RFNGQ9Y644 331 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 MROH5Q6ZUA9 1318 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 AK9Q5TCS8 1911 aa1.83□□□□□ -2.12
SCFD1-213ENST00000554776 ANKRD12Q6UB98 2062 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 SLIT3O75094 1523 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 ZNF608Q9ULD9 1512 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 IGKV6-21A0A0C4DH24 114 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 C7orf66A4D0T2 115 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 TVP23AA6NH52 213 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 COLCA2A8K830 154 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 LINC01619G3V211 115 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 K7EM74 188 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 MANBAO00462 879 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 RFXANKO14593 260 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 EIF1BO60739 113 aaKnown RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 TRAPPC6AO75865 159 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 MPZL1O95297 269 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 CISD3P0C7P0 127 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 CCDC172P0C7W6 258 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 ZNF286BP0CG31 522 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 C1GALT1C1LP0DN25 315 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 GFAPP14136 432 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 HTR2CP28335 458 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 APLNRP35414 380 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 EIF1P41567 113 aaKnown RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 HCCSP53701 268 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 SLC35A1P78382 337 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 RPL18AQ02543 176 aaKnown RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 PPIDQ08752 370 aaKnown RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 INCA1Q0VD86 236 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 PIGHQ14442 188 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 PRSS8Q16651 343 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 CPTPQ5TA50 214 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 DUPD1Q68J44 220 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 SHISA6Q6ZSJ9 500 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 Q6ZSR6 202 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 DAW1Q8N136 415 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 DRAM1Q8N682 238 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 CYB561A3Q8NBI2 242 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 OR5T1Q8NG75 326 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 MITD1Q8WV92 249 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 TMEM234Q8WY98 164 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 CPNE4Q96A23 557 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-213ENST00000554776 OR10C1Q96KK4 312 aa1.82□□□□□ -2.12
SCFD1-213ENST00000554776 Q96MT0 163 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms