RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GRB2P62993 217 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 GABPB1Q06547 395 aaPredicted RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 EIF2B1Q14232 305 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 TAF13Q15543 124 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 PLBD1Q6P4A8 553 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 FAHD1Q6P587 224 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 SHFQ7M4L6 423 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 KLBQ86Z14 1044 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 ERI1Q8IV48 349 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 OR6N2Q8NGY6 317 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 SPRYD4Q8WW59 207 aaPredicted RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 SSMEM1Q8WWF3 244 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 DYRK2Q92630 601 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 STMN2Q93045 179 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 NUDT16L1Q9BRJ7 211 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 GABARAPL1Q9H0R8 117 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 OR51V1Q9H2C8 321 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 OPA3Q9H6K4 179 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 SLC25A19Q9HC21 320 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 MRPL15Q9P015 296 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 NOP16Q9Y3C1 178 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 IGHV3-64DA0A0J9YX35 117 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 PRODHO43272 600 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 XRCC2O43543 280 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 ZNF205O95201 554 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 APOC1P02654 83 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 MELTFP08582 738 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 SLC2A5P22732 501 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 DDOSTP39656 456 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 OPRL1P41146 370 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 CX3CR1P49238 355 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 DAPP51397 102 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 FGF12P61328 243 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 FAM3AP98173 230 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 MPPED2Q15777 294 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 ZNF404Q494X3 552 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 SLC35D3Q5M8T2 416 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 FAM201AQ5SY85 155 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 TMEM236Q5W0B7 351 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 NLRC3Q7RTR2 1065 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 CPOQ8IVL8 374 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 C1orf87Q8N0U7 546 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 PLPP7Q8NBV4 271 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 OTOSQ8NHW6 89 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 DACT3Q96B18 629 aaPredicted RBP9.8□□□□□ -0.84
SRP54-203ENST00000553544 OTULINQ96BN8 352 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 SGK3Q96BR1 496 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 NEIL1Q96FI4 390 aaPredicted RBP9.8□□□□□ -0.84
SRP54-203ENST00000553544 TMEM246Q9BRR3 403 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 KRT84Q9NSB2 600 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 ZNF319Q9P2F9 582 aa9.8□□□□□ -0.84
SRP54-203ENST00000553544 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 LRRC30A6NM36 301 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 SELENOFO60613 162 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 FAM20BO75063 409 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 LYNP07948 512 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 CRISP1P54107 249 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 PROK1P58294 105 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 KPNB1Q14974 876 aaKnown RBP9.79□□□□□ -0.84
SRP54-203ENST00000553544 OR8G1Q15617 311 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 C2orf68Q2NKX9 166 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 SLC16A9Q7RTY1 509 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 SPERTQ8NA61 448 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 BBS1Q8NFJ9 593 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 OR8B3Q8NGG8 313 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 OR56B2PQ8NGI1 322 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 OR52H1Q8NGJ2 320 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 OR8B2Q96RD0 313 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 ADAT1Q9BUB4 502 aaKnown RBP9.79□□□□□ -0.84
SRP54-203ENST00000553544 CLN8Q9UBY8 286 aa9.79□□□□□ -0.84
SRP54-203ENST00000553544 hCG_38984A0A1B0GV85 526 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 TNFRSF13BO14836 293 aaPredicted RBP9.78□□□□□ -0.84
SRP54-203ENST00000553544 TSPAN15O95858 294 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 ANXA2P07355 339 aaKnown RBP9.78□□□□□ -0.84
SRP54-203ENST00000553544 ALOX5APP20292 161 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 HSD11B1P28845 292 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 PITPNBP48739 271 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 ZNF121P58317 390 aaPredicted RBP9.78□□□□□ -0.84
SRP54-203ENST00000553544 EFNB1P98172 346 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 PTGES3Q15185 160 aaKnown RBP9.78□□□□□ -0.84
SRP54-203ENST00000553544 KLHL12Q53G59 568 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 LCN1P1Q5VSP4 162 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 OR11L1Q8NGX0 322 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 PYDC1Q8WXC3 89 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 REEP6Q96HR9 211 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 TEAD3Q99594 435 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 PCGF1Q9BSM1 259 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 SP140LQ9H930 580 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 UFSP2Q9NUQ7 469 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 N6AMT1Q9Y5N5 214 aa9.78□□□□□ -0.84
SRP54-203ENST00000553544 CCDC182A6NF36 153 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 P2RY10O00398 339 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 PIN1P1O15428 100 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 TBX1O43435 398 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 GPR137BO60478 399 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms