RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 DYSFO75923 2080 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 CUBNO60494 3623 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 TRAV38-1A0A0B4J264 116 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 A6NLC8 198 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 F5H0A9 414 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-204ENST00000553324 KRT8P05787 483 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 SNRPGP62308 76 aaKnown RBP12.86□□□□□ -0.35
SHMT2-204ENST00000553324 DCDC5Q6ZRR9 648 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 KRT74Q7RTS7 529 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 EME1Q96AY2 570 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-204ENST00000553324 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-204ENST00000553324 TMEM246Q9BRR3 403 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 RNPEPL1Q9HAU8 725 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 C1orf123Q9NWV4 160 aa12.86□□□□□ -0.35
SHMT2-204ENST00000553324 NUFIP1Q9UHK0 495 aaKnown RBP12.86□□□□□ -0.35
SHMT2-204ENST00000553324 TMEM210A6NLX4 147 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 A8MXK9 166 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 MPZL2O60487 215 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 SULT1C4O75897 302 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF205O95201 554 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 BAG2O95816 211 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
SHMT2-204ENST00000553324 ZFP36P26651 326 aaKnown RBP12.85□□□□□ -0.35
SHMT2-204ENST00000553324 RIPPLY1Q0D2K3 151 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 OCLNQ16625 522 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 ZIK1Q3SY52 487 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-204ENST00000553324 ZBTB37Q5TC79 503 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF771Q7L3S4 317 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-204ENST00000553324 COMMD2Q86X83 199 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 SEMA6DQ8NFY4 1073 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 OR1M1Q8NGA1 313 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 OR8B3Q8NGG8 313 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 NANPQ8TBE9 248 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 PIGCQ92535 297 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 LYZL4Q96KX0 146 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 OR8B2Q96RD0 313 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 APOL4Q9BPW4 351 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 RTL8AQ9BWD3 113 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 SSBP3Q9BWW4 388 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-204ENST00000553324 C7orf69Q9H7B7 122 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 OR5V1Q9UGF6 321 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 PCDHGB1Q9Y5G3 927 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 SNX5Q9Y5X3 404 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 R4GMQ9 66 aa12.85□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF816-ZNF321PA0A0X1KG74 233 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 E9PQ18 207 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 LGALS8O00214 317 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 LHBP01229 141 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 ACKR3P25106 362 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 CFHR2P36980 270 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 MTNR1AP48039 350 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 NPY4RP50391 375 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 GNB2P62879 340 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 PRDX4Q13162 271 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 FAM76BQ5HYJ3 339 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 LIPNQ5VXI9 398 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 THAP5Q7Z6K1 395 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 ZDHHC23Q8IYP9 409 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 OR10H4Q8NGA5 316 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 TMEM158Q8WZ71 300 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 DVL3Q92997 716 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-204ENST00000553324 ITPKCQ96DU7 683 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 Q96MT0 163 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 TMPRSS13Q9BYE2 586 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 GMPPBQ9Y5P6 360 aa12.84□□□□□ -0.35
SHMT2-204ENST00000553324 A0A1W2PQL4 384 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-204ENST00000553324 OOEPA6NGQ2 149 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 METTL15A6NJ78 407 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF850A8MQ14 1090 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 PRR32B1ATL7 298 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 DHRS3O75911 302 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 RBMXP38159 391 aaKnown RBP12.83□□□□□ -0.36
SHMT2-204ENST00000553324 ACTC1P68032 377 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 ACTA1P68133 377 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF154Q13106 437 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.36
SHMT2-204ENST00000553324 FAM201AQ5SY85 155 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 BCL2L15Q5TBC7 163 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 BTNL3Q6UXE8 466 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 ELMOD2Q8IZ81 293 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 YIPF7Q8N8F6 280 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 DEFB108BQ8NET1 73 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 OR51E1Q8TCB6 317 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 OR5P3Q8WZ94 311 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 UBE2FQ969M7 185 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 RNF170Q96K19 258 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 RDH12Q96NR8 316 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 TLNRD1Q9H1K6 362 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-204ENST00000553324 GPR84Q9NQS5 396 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 C8orf4Q9NR00 106 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 ERVK-18Q9QC07 812 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms