RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 GMFBP60983 142 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 ROM1Q03395 351 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 POU4F2Q12837 409 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 PRDX4Q13162 271 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 ZNF181Q2M3W8 571 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 ZNF829Q3KNS6 432 aaPredicted RBP13.21□□□□□ -0.29
DDX54-205ENST00000548786 ZNF404Q494X3 552 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 ESCO2Q56NI9 601 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 LYPD2Q6UXB3 125 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 KCTD8Q6ZWB6 473 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 KLBQ86Z14 1044 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 CSNK2A3Q8NEV1 391 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 OR8J1Q8NGP2 316 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 PIGCQ92535 297 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 TMPRSS13Q9BYE2 586 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 GPR84Q9NQS5 396 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
DDX54-205ENST00000548786 A0A1W2PQL4 384 aaPredicted RBP13.2□□□□□ -0.3
DDX54-205ENST00000548786 RNF212BA8MTL3 300 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 F5H0A9 414 aaPredicted RBP13.2□□□□□ -0.3
DDX54-205ENST00000548786 LOC110117498-PIK3R3F6TDL0 507 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 TRAPPC2LH3BP13 241 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 ZNF254O75437 659 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 EGR1P18146 543 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 ODF4Q2M2E3 257 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 BCL2L15Q5TBC7 163 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 C10orf67Q8IYJ2 551 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 PQLC1Q8N2U9 271 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 YIPF7Q8N8F6 280 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 SPERTQ8NA61 448 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 STMN2Q93045 179 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 ERGIC1Q969X5 290 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 SLC29A1Q99808 456 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 C9orf16Q9BUW7 83 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
DDX54-205ENST00000548786 MRM2Q9UI43 246 aaKnown RBP13.2□□□□□ -0.3
DDX54-205ENST00000548786 ANXA2P2A6NMY6 339 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 PHYHO14832 338 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 ENTPD6O75354 484 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 PTBP3O95758 552 aaKnown RBP13.19□□□□□ -0.3
DDX54-205ENST00000548786 WNT2P09544 360 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 THBS2P35442 1172 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 GNB2P62879 340 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 MZT1Q08AG7 82 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 ZNF154Q13106 437 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 CEP78Q5JTW2 689 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 DEGS2Q6QHC5 323 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 ZBTB49Q6ZSB9 765 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 FTMTQ8N4E7 242 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 OR1M1Q8NGA1 313 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 LRRC29Q8WV35 223 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 ITPKCQ96DU7 683 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 NEIL1Q96FI4 390 aaPredicted RBP13.19□□□□□ -0.3
DDX54-205ENST00000548786 HRASLS5Q96KN8 279 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
DDX54-205ENST00000548786 FGF23Q9GZV9 251 aaPredicted RBP13.19□□□□□ -0.3
DDX54-205ENST00000548786 HAO2Q9NYQ3 351 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 MIOXQ9UGB7 285 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 OR5V1Q9UGF6 321 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 GMPPBQ9Y5P6 360 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 DNHD1Q96M86 4753 aa13.19□□□□□ -0.3
DDX54-205ENST00000548786 CDIPTO14735 213 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
DDX54-205ENST00000548786 GYPAP02724 150 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 TTRP02766 147 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 KRT8P05787 483 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 FAHP16930 419 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 PITPNBP48739 271 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 ELF3P78545 371 aaPredicted RBP13.18□□□□□ -0.3
DDX54-205ENST00000548786 IL5RAQ01344 420 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 NLRC3Q7RTR2 1065 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 C11orf53Q8IXP5 236 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 ZDHHC23Q8IYP9 409 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 GCSAMQ8N6F7 178 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 OR5P3Q8WZ94 311 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 RPL3LQ92901 407 aaKnown RBP13.18□□□□□ -0.3
DDX54-205ENST00000548786 RFKQ969G6 155 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 RNFT2Q96EX2 444 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 TECTBQ96PL2 329 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 MNTQ99583 582 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 RTL8AQ9BWD3 113 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 NUFIP1Q9UHK0 495 aaKnown RBP13.18□□□□□ -0.3
DDX54-205ENST00000548786 OPN4Q9UHM6 478 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 OR52A1Q9UKL2 312 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 SLC22A13Q9Y226 551 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 PIGLQ9Y2B2 252 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 R4GMQ9 66 aa13.18□□□□□ -0.3
DDX54-205ENST00000548786 A0A0U1RQV5 110 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 OOEPA6NGQ2 149 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 A6NIN4 97 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 ACOD1A6NK06 481 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms