RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
SSH1-208ENST00000548522 ENPP4Q9Y6X5 453 aa13.6□□□□□ -0.23
SSH1-208ENST00000548522 DOCK11Q5JSL3 2073 aa13.6□□□□□ -0.23
SSH1-208ENST00000548522 ZNF701M0R085 212 aaPredicted RBP13.59□□□□□ -0.23
SSH1-208ENST00000548522 LGALS8O00214 317 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 OR10H3O60404 316 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 MRPS14O60783 128 aaKnown RBP13.59□□□□□ -0.23
SSH1-208ENST00000548522 CLPXO76031 633 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 TXNDC12O95881 172 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 GYPAP02724 150 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 LCATP04180 440 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 GNAO1P09471 354 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 RHCEP18577 417 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 NPY4RP50391 375 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 CXCR4P61073 352 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 ARF6P62330 175 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 OR8G1Q15617 311 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 OR8B8Q15620 311 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 METTL11BQ5VVY1 283 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 FOXB2Q5VYV0 432 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 DPY19L2P2Q6ZN68 376 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 Q6ZSV7 163 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 ZNF826PQ6ZT77 177 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 PGAP1Q75T13 922 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 RRM2BQ7LG56 351 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 FAM110DQ8TAY7 271 aaPredicted RBP13.59□□□□□ -0.23
SSH1-208ENST00000548522 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
SSH1-208ENST00000548522 ERGIC1Q969X5 290 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 PITX2Q99697 317 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 ATF6BQ99941 703 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 TCF7L1Q9HCS4 588 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
SSH1-208ENST00000548522 NDUFAF4Q9P032 175 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 KIF17Q9P2E2 1029 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 ERVK-18Q9QC07 812 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 RNF7Q9UBF6 113 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 B9D1Q9UPM9 204 aa13.59□□□□□ -0.23
SSH1-208ENST00000548522 IGHV3OR15-7A0A075B7D8 119 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 LOC100130705A0A1B0GUX0 176 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 CD300LBA8K4G0 201 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 DIRAS1O95057 198 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 H1F0P07305 194 aaKnown RBP13.58□□□□□ -0.24
SSH1-208ENST00000548522 CCDC159P0C7I6 412 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 PSKH1P11801 424 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 ANXA8P13928 327 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 GGT2P36268 569 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 RPS27P42677 84 aaKnown RBP13.58□□□□□ -0.24
SSH1-208ENST00000548522 IER3P46695 156 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 DLX1P56177 255 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 ZNF691Q5VV52 312 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 CD276Q5ZPR3 534 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 HIST2H2BDQ6DRA6 164 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 MRPL21Q7Z2W9 205 aaKnown RBP13.58□□□□□ -0.24
SSH1-208ENST00000548522 TMEM179BQ7Z7N9 219 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 LDLRAD3Q86YD5 345 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 FAM90A1Q86YD7 464 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 TBC1D15Q8TC07 691 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 MAP6Q96JE9 813 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 ERMAPQ96PL5 475 aaPredicted RBP13.58□□□□□ -0.24
SSH1-208ENST00000548522 GABARAPL3Q9BY60 117 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 RBM38Q9H0Z9 239 aaKnown RBP13.58□□□□□ -0.24
SSH1-208ENST00000548522 ANKRD19PQ9H560 264 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 FN3KRPQ9HA64 309 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 RPRD1BQ9NQG5 326 aaKnown RBP13.58□□□□□ -0.24
SSH1-208ENST00000548522 C1orf123Q9NWV4 160 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 VNN3Q9NY84 501 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
SSH1-208ENST00000548522 A0A1W2PRQ8 180 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 OOEPA6NGQ2 149 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 UNC119BA6NIH7 251 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 PTBP3O95758 552 aaKnown RBP13.57□□□□□ -0.24
SSH1-208ENST00000548522 CRABP1P29762 137 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 RPL15P61313 204 aaKnown RBP13.57□□□□□ -0.24
SSH1-208ENST00000548522 ZNF92Q03936 586 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 MALLQ13021 153 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 DGCR6Q14129 220 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 DNM1P34Q6PK57 102 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 BTN2A1Q7KYR7 527 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 PNLDC1Q8NA58 520 aaKnown RBP13.57□□□□□ -0.24
SSH1-208ENST00000548522 SCCPDHQ8NBX0 429 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 OR4K13Q8NH42 304 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 FANK1Q8TC84 345 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 DHRS1Q96LJ7 313 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 MRPL22Q9NWU5 206 aaKnown RBP13.57□□□□□ -0.24
SSH1-208ENST00000548522 CYB5R1Q9UHQ9 305 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
SSH1-208ENST00000548522 DNAH3Q8TD57 4116 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 DVL1O14640 695 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 LIPFP07098 398 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
SSH1-208ENST00000548522 JUNBP17275 347 aaPredicted RBP13.56□□□□□ -0.24
SSH1-208ENST00000548522 DAPP51397 102 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 SMIM11AP58511 58 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 CSNK2BP67870 215 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 GLYATL3Q5SZD4 288 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 ZNF773Q6PK81 442 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms