RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GSKIPQ9P0R6 139 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 MYOTQ9UBF9 498 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
LDLR-204ENST00000545707 TEX13DA0A0J9YY54 714 aaPredicted RBP13.92□□□□□ -0.18
LDLR-204ENST00000545707 GDF9O60383 454 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 BAP18Q8IXM2 172 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 OR5H2Q8NGV7 314 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 PCDHB16Q9NRJ7 776 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 FBLN5Q9UBX5 448 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 F5H5K5 113 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 SCRG1O75711 98 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 SCGNO76038 276 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 HOXB5P09067 269 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 TBPP20226 339 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 GSK3AP49840 483 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 AIMP2Q13155 320 aaKnown RBP13.92□□□□□ -0.18
LDLR-204ENST00000545707 WDR74Q6RFH5 385 aaPredicted RBP13.92□□□□□ -0.18
LDLR-204ENST00000545707 DRAM2Q6UX65 266 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 GALNTL5Q7Z4T8 443 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 LYZL4Q96KX0 146 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 NMES1Q9C002 83 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 METTL8Q9H825 291 aaKnown RBP13.92□□□□□ -0.18
LDLR-204ENST00000545707 FANCFQ9NPI8 374 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 FLVCR1Q9Y5Y0 555 aa13.92□□□□□ -0.18
LDLR-204ENST00000545707 IGHV3-15A0A0B4J1V0 119 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 ZNF726A6NNF4 738 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 MFNGO00587 321 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 FGF16O43320 207 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 SFT2D2O95562 160 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 GSTP1P09211 210 aaKnown RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 TPT1P13693 172 aaKnown RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 CLDN17P56750 224 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 AADACL3Q5VUY0 350 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CRIP3Q6Q6R5 217 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CBLN2Q8IUK8 224 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CARFQ8N187 725 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 LRRC18Q8N456 261 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 ELL3Q9HB65 397 aaPredicted RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 IGLV3-12A0A075B6K2 115 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 OR5H15A6NDH6 313 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 F8VVB4 439 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 F8VWA3 439 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 STMND1H3BQB6 276 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 BCAT2O15382 392 aaPredicted RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 WDPCPO95876 746 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 KNG1P01042 644 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CELA2AP08217 269 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 SERPINA2P20848 420 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 OR3A2P47893 321 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 SLC6A9P48067 706 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 SNU13P55769 128 aaKnown RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 TAS2R31P59538 309 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CSNK2A1P68400 391 aaPredicted RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 RAB32Q13637 225 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 KISS1Q15726 138 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 VAX1Q5SQQ9 334 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 ZNF585AQ6P3V2 769 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CPEB2Q7Z5Q1 589 aaKnown RBP13.91□□□□□ -0.18
LDLR-204ENST00000545707 LDLRAD3Q86YD5 345 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 WDSUB1Q8N9V3 476 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 CSNK2A3Q8NEV1 391 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 OR2M3Q8NG83 312 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 OR10A2Q9H208 303 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 ACKR4Q9NPB9 350 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 EHFQ9NZC4 300 aa13.91□□□□□ -0.18
LDLR-204ENST00000545707 ETV2O00321 342 aaPredicted RBP13.9□□□□□ -0.18
LDLR-204ENST00000545707 FAHP16930 419 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 NAT1P18440 290 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 BLVRBP30043 206 aaPredicted RBP13.9□□□□□ -0.18
LDLR-204ENST00000545707 PRSS12P56730 875 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 PHYHD1Q5SRE7 291 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 CCDC36Q8IYA8 594 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 OR56B1Q8NGI3 324 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 OR4A4PQ8NGN8 299 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 OR14K1Q8NGZ2 314 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 PGAM5Q96HS1 289 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 CRB3Q9BUF7 120 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 SLC6A15Q9H2J7 730 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 SDK2Q58EX2 2172 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 IGKV1D-8A0A087WSZ0 117 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 ZFAND5O76080 213 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 S100A10P60903 97 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 DCDP81605 110 aaKnown RBP13.9□□□□□ -0.18
LDLR-204ENST00000545707 UBE2V2Q15819 145 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 PABPC1L2AQ5JQF8 200 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 GUSBP11Q6P575 273 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 ARRDC1Q8N5I2 433 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 SLC30A7Q8NEW0 376 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 OR6X1Q8NH79 312 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 ZNF775Q96BV0 537 aaPredicted RBP13.9□□□□□ -0.18
LDLR-204ENST00000545707 OCSTAMPQ9BR26 566 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 TLNRD1Q9H1K6 362 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 SAV1Q9H4B6 383 aaPredicted RBP13.9□□□□□ -0.18
LDLR-204ENST00000545707 MOB1AQ9H8S9 216 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 FAM96BQ9Y3D0 163 aa13.9□□□□□ -0.18
LDLR-204ENST00000545707 NCOA6Q14686 2063 aaPredicted RBP13.9□□□□□ -0.19
LDLR-204ENST00000545707 EXPH5Q8NEV8 1989 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 TRBV6-7A0A0A0MS04 114 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 F8W036 122 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms