RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ANXA8P13928 327 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 PAICSP22234 425 aaKnown RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 CD200P41217 278 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 SLC15A1P46059 708 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 CBX1P83916 185 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 ZMYND11Q15326 602 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 SNAI3Q3KNW1 292 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 DCAF12L2Q5VW00 463 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 LIPNQ5VXI9 398 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 C1QL2Q7Z5L3 287 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 TMEM179BQ7Z7N9 219 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 LRRC28Q86X40 367 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 C1orf87Q8N0U7 546 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 IQCF1Q8N6M8 205 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 PAPD5Q8NDF8 572 aaKnown RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 Q8TCH9 128 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 ERGIC1Q969X5 290 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 NRBF2Q96F24 287 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 INTS14Q96SY0 518 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 TOR3AQ9H497 397 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 METTL17Q9H7H0 456 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF556Q9HAH1 456 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 PATZ1Q9HBE1 687 aaKnown RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 TMEM100Q9NV29 134 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 MRPL15Q9P015 296 aaKnown RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 DNAJB9Q9UBS3 223 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 LRCH1Q9Y2L9 728 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 FAM183AA6NL82 134 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 CD300LBA8K4G0 201 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 CEACAM18A8MTB9 384 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 F5H5P2 479 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 H0YL77 283 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 APOC1P02654 83 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 HLA-DPB1P04440 258 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 HMGN1P05114 100 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SBK2P0C263 348 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 RASSF2P50749 326 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 RAD23AP54725 363 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF92Q03936 586 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 BNIP1Q12981 228 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 HNRNPA0Q13151 305 aaKnown RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 MAB21L1Q13394 359 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 EIF2B1Q14232 305 aaKnown RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 TAF13Q15543 124 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 ESCO2Q56NI9 601 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 GLYATL3Q5SZD4 288 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 FAHD2BQ6P2I3 314 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SHFQ7M4L6 423 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 DPY19L4Q7Z388 723 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 NAA40Q86UY6 237 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 MOGAT3Q86VF5 341 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 ERI1Q8IV48 349 aaKnown RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 TIGD4Q8IY51 512 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 PARP8Q8N3A8 854 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 OR52H1Q8NGJ2 320 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 OR6N2Q8NGY6 317 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 OR2AE1Q8NHA4 323 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF420Q8TAQ5 688 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 RNF133Q8WVZ7 376 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SPRYD4Q8WW59 207 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SPSB4Q96A44 273 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SLCO4A1Q96BD0 722 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 FAHD2AQ96GK7 314 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 OR14A2Q96R54 314 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 GPHA2Q96T91 129 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 ADAT1Q9BUB4 502 aaKnown RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 ABHD6Q9BV23 337 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 C19orf24Q9BVV8 132 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 TEX12Q9BXU0 123 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 CADM1Q9BY67 442 aaKnown RBP6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SP140LQ9H930 580 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 SLC25A19Q9HC21 320 aa6.43□□□□□ -1.38
SNHG1-223ENST00000545440 LOC105371242A0A075B767 164 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 GGT3PA6NGU5 568 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 PRR23D1E9PI22 279 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 GMDSO60547 372 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 TUSC2O75896 110 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 ATP5HO75947 161 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 CYB5R3P00387 301 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 FSHBP01225 129 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 PRR23D2P0DMB1 279 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 SLC2A1P11166 492 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 IRF2P14316 349 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 RPS2P15880 293 aaKnown RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 SLC2A5P22732 501 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 ANOS1P23352 680 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 CFL1P23528 166 aaKnown RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 ZFP36P26651 326 aaKnown RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 POU1F1P28069 291 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 HSD11B1P28845 292 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 DDOSTP39656 456 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 OPRL1P41146 370 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 CX3CR1P49238 355 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 PRKXP51817 358 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 SEC61A1P61619 476 aaKnown RBP6.42□□□□□ -1.38
SNHG1-223ENST00000545440 LCN2P80188 198 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 CDK5Q00535 292 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 MZT1Q08AG7 82 aa6.42□□□□□ -1.38
SNHG1-223ENST00000545440 GINS1Q14691 196 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms