RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 MAP2K3P46734 347 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 ZNF404Q494X3 552 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 FAM201AQ5SY85 155 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 ZBTB49Q6ZSB9 765 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 BOLLQ8N9W6 283 aaKnown RBP13.18□□□□□ -0.3
CCDC78-216ENST00000544996 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 EME1Q96AY2 570 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 HIST1H2AAQ96QV6 131 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 MOB1AQ9H8S9 216 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 TRIM36Q9NQ86 728 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 OR5V1Q9UGF6 321 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 NUFIP1Q9UHK0 495 aaKnown RBP13.18□□□□□ -0.3
CCDC78-216ENST00000544996 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC78-216ENST00000544996 GTF2A1LQ9UNN4 478 aa13.18□□□□□ -0.3
CCDC78-216ENST00000544996 SNTNA6NMZ2 147 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 ZNF850A8MQ14 1090 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 PRR32B1ATL7 298 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 LOC110117498-PIK3R3F6TDL0 507 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 ATP6V1B1P15313 513 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 ACKR3P25106 362 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 ZFP36P26651 326 aaKnown RBP13.17□□□□□ -0.3
CCDC78-216ENST00000544996 SEC61A1P61619 476 aaKnown RBP13.17□□□□□ -0.3
CCDC78-216ENST00000544996 GNB2P62879 340 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 PRDX4Q13162 271 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 SLC25A30Q5SVS4 291 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 BCL2L15Q5TBC7 163 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 DCDC5Q6ZRR9 648 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 THAP5Q7Z6K1 395 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 GALNT4Q8N4A0 578 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 RFLNBQ8N5W9 214 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 OR10H4Q8NGA5 316 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 PIGCQ92535 297 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 NEIL1Q96FI4 390 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-216ENST00000544996 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 TBX5Q99593 518 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 RTL8AQ9BWD3 113 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 SSBP3Q9BWW4 388 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-216ENST00000544996 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 METTL17Q9H7H0 456 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-216ENST00000544996 GPR84Q9NQS5 396 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-216ENST00000544996 SNX5Q9Y5X3 404 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 R4GMQ9 66 aa13.17□□□□□ -0.3
CCDC78-216ENST00000544996 TRAV38-1A0A0B4J264 116 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 ZNF816-ZNF321PA0A0X1KG74 233 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 A0A1W2PQL4 384 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 A8MXK9 166 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 LGALS8O00214 317 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 MTRF1O75570 445 aaKnown RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 SNRPGP62308 76 aaKnown RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 MFGE8Q08431 387 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 SFRP4Q6FHJ7 346 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 ZNF826PQ6ZT77 177 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 ZDHHC23Q8IYP9 409 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 YIPF7Q8N8F6 280 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 OR1M1Q8NGA1 313 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 OR51E1Q8TCB6 317 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 ITPKCQ96DU7 683 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 FAM71F1Q96KD3 344 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 TMPRSS13Q9BYE2 586 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 RNPEPL1Q9HAU8 725 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 MRM2Q9UI43 246 aaKnown RBP13.16□□□□□ -0.3
CCDC78-216ENST00000544996 GMPPBQ9Y5P6 360 aa13.16□□□□□ -0.3
CCDC78-216ENST00000544996 LOC105371242A0A075B767 164 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 OOEPA6NGQ2 149 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 TMEM210A6NLX4 147 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 MAGEB4O15481 346 aaPredicted RBP13.15□□□□□ -0.3
CCDC78-216ENST00000544996 NDUFA2O43678 99 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 MPZL2O60487 215 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 RPP14O95059 124 aaKnown RBP13.15□□□□□ -0.3
CCDC78-216ENST00000544996 APOL3O95236 402 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 MTNR1AP48039 350 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 PITPNBP48739 271 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 ZNF154Q13106 437 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 OCLNQ16625 522 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 ZBTB37Q5TC79 503 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 LIPNQ5VXI9 398 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 PLEKHG7Q6ZR37 379 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 WDR86Q86TI4 376 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 ELMOD2Q8IZ81 293 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 C19orf18Q8NEA5 215 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 NANPQ8TBE9 248 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 TMEM158Q8WZ71 300 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 UBE2FQ969M7 185 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 RNF170Q96K19 258 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 MBOAT4Q96T53 435 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 MDFIQ99750 246 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms