RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SLC3A1Q07837 685 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 BCL2L15Q5TBC7 163 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 ZBTB37Q5TC79 503 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 CLEC9AQ6UXN8 241 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 SYS1Q8N2H4 156 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 PRSS35Q8N3Z0 413 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 ERGIC1Q969X5 290 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 ITPKCQ96DU7 683 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 GNG8Q9UK08 70 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 SLC22A13Q9Y226 551 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 V9GYS6 101 aa16.12■□□□□ 0.17
DDX55-211ENST00000544429 DHRS7CA6NNS2 312 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 TMEM178BH3BS89 294 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 FSTL3O95633 263 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 IGHV2-70P01814 119 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 LIMS3P0CW19 117 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 LIMS4P0CW20 117 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 IL2RGP31785 369 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 WDR38Q5JTN6 314 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 WDR86Q86TI4 376 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 LHFPL3Q86UP9 236 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 FTMTQ8N4E7 242 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 CLDND2Q8NHS1 167 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 DVL3Q92997 716 aaPredicted RBP16.11■□□□□ 0.17
DDX55-211ENST00000544429 PELI1Q96FA3 418 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 ALG8Q9BVK2 526 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 PLCXD1Q9NUJ7 323 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 MPC1Q9Y5U8 109 aa16.11■□□□□ 0.17
DDX55-211ENST00000544429 ANK3Q12955 4377 aaKnown RBP16.11■□□□□ 0.17
DDX55-211ENST00000544429 FN1P02751 2386 aaKnown RBP16.11■□□□□ 0.17
DDX55-211ENST00000544429 CD5LO43866 347 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 DHRS3O75911 302 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 DCKP27707 260 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 KIR3DL2P43630 455 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 MAP2K3P46734 347 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 NANOS3P60323 173 aaKnown RBP16.1■□□□□ 0.17
DDX55-211ENST00000544429 LMO4P61968 165 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 MPPED2Q15777 294 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 FAM76BQ5HYJ3 339 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 C6orf52Q5T4I8 152 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 TMEM42Q69YG0 159 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 ZNF771Q7L3S4 317 aaPredicted RBP16.1■□□□□ 0.17
DDX55-211ENST00000544429 FAM220AQ7Z4H9 259 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 THAP5Q7Z6K1 395 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 OR14K1Q8NGZ2 314 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 OR2G2Q8NGZ5 317 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 ZNF420Q8TAQ5 688 aaPredicted RBP16.1■□□□□ 0.17
DDX55-211ENST00000544429 C4orf36Q96KX1 117 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 FGF23Q9GZV9 251 aaPredicted RBP16.1■□□□□ 0.17
DDX55-211ENST00000544429 ABCB9Q9NP78 766 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 NPTNQ9Y639 398 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 HIVEP2P31629 2446 aa16.1■□□□□ 0.17
DDX55-211ENST00000544429 ZNF816-ZNF321PA0A0X1KG74 233 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 IRGMA1A4Y4 181 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 PIPP12273 146 aaPredicted RBP16.09■□□□□ 0.17
DDX55-211ENST00000544429 PSMB10P40306 273 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 CCR9P51686 369 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 AVPI1Q5T686 147 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 PRAMEF6Q5VXH4 476 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 MOGAT3Q86VF5 341 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 C11orf53Q8IXP5 236 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 SEMA6DQ8NFY4 1073 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 HPSE2Q8WWQ2 592 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 OR5P3Q8WZ94 311 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 RAB1CQ92928 201 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 MRPL48Q96GC5 212 aaKnown RBP16.09■□□□□ 0.17
DDX55-211ENST00000544429 TIMD4Q96H15 378 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 FAM71F1Q96KD3 344 aaPredicted RBP16.09■□□□□ 0.17
DDX55-211ENST00000544429 PAPOLGQ9BWT3 736 aaKnown RBP16.09■□□□□ 0.17
DDX55-211ENST00000544429 TLNRD1Q9H1K6 362 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 VCX3BQ9H321 246 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 ISG20L2Q9H9L3 353 aaKnown RBP16.09■□□□□ 0.17
DDX55-211ENST00000544429 FRRS1LQ9P0K9 344 aa16.09■□□□□ 0.17
DDX55-211ENST00000544429 DIMT1Q9UNQ2 313 aaKnown RBP16.09■□□□□ 0.17
DDX55-211ENST00000544429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 IGHV3-64DA0A0J9YX35 117 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 P2RY10O00398 339 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 MTRF1O75570 445 aaKnown RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 ISG15P05161 165 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 GZMKP49863 264 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 MVKQ03426 396 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 MZT1Q08AG7 82 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 RIPPLY1Q0D2K3 151 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 PRDX4Q13162 271 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 DOK3Q7L591 496 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 LRRC28Q86X40 367 aaPredicted RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 GGHQ92820 318 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 MSI2Q96DH6 328 aaKnown RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 MYCBPQ99417 103 aaPredicted RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 ANKRD60Q9BZ19 345 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 FKBP14Q9NWM8 211 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 C14orf119Q9NWQ9 140 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 CNOT2Q9NZN8 540 aaKnown RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 PSORS1C1Q9UIG5 152 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 GTF2A1LQ9UNN4 478 aa16.08■□□□□ 0.16
DDX55-211ENST00000544429 SONP18583 2426 aaKnown RBP16.08■□□□□ 0.16
DDX55-211ENST00000544429 OR4C45A6NMZ5 311 aa16.07■□□□□ 0.16
DDX55-211ENST00000544429 ZNF850A8MQ14 1090 aa16.07■□□□□ 0.16
DDX55-211ENST00000544429 J3QLW9 94 aa16.07■□□□□ 0.16
DDX55-211ENST00000544429 UBCP0CG48 685 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms