RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 RGCCQ9H4X1 137 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SMURF1Q9HCE7 757 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 BRD7Q9NPI1 651 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 C14orf119Q9NWQ9 140 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TVP23BQ9NYZ1 205 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 LRP12Q9Y561 859 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 VWFP04275 2813 aa10.89□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 NDUFA2O43678 99 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CST4P01036 141 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CFHR2P36980 270 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 NPY4RP50391 375 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ESRRGP62508 458 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 UBA52P62987 128 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CSNK2BP67870 215 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ELF3P78545 371 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 POU4F2Q12837 409 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KDM4DQ6B0I6 523 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DEGS2Q6QHC5 323 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 GALNT4Q8N4A0 578 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 BOLLQ8N9W6 283 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CSNK2A3Q8NEV1 391 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 OR8B12Q8NGG6 310 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 GABARAPL1Q9H0R8 117 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 RNPEPL1Q9HAU8 725 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 FAM206AQ9NX38 181 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KAAG1Q9UBP8 84 aa10.88□□□□□ -0.67
TNFRSF1A-215ENST00000543359 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 IGHV3OR16-10A0A075B7F0 116 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TRAV38-1A0A0B4J264 116 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZAR1LA6NP61 321 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ADAM20O43506 726 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 IGLV3-1P01715 115 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 GYPAP02724 150 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MMP9P14780 707 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 AMY2BP19961 511 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CFPP27918 469 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 RPS7P62081 194 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ROM1Q03395 351 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KCNJ8Q15842 424 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 GFOD2Q3B7J2 385 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 AADACL4Q5VUY2 407 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SLX4IPQ5VYV7 408 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 BTNL3Q6UXE8 466 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 BCDIN3DQ7Z5W3 292 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 OR8S1Q8NH09 359 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 OR5P3Q8WZ94 311 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SEH1LQ96EE3 360 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 RASSF4Q9H2L5 321 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MMADHCQ9H3L0 296 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 NIPAL2Q9H841 368 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ERVK-18Q9QC07 812 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 LAMP5Q9UJQ1 280 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 COPS3Q9UNS2 423 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 AP4S1Q9Y587 144 aa10.87□□□□□ -0.67
TNFRSF1A-215ENST00000543359 A0A0U1RQV5 110 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 A0A1B0GW55 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 A6NLC8 198 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZNF850A8MQ14 1090 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 G3V2T6 193 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 M0R129 80 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CDIPTO14735 213 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SRSF10O75494 262 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ATP5HO75947 161 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L2P0CJ85 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L3P0CJ86 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L4P0CJ87 422 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L5P0CJ88 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L6P0CJ89 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L7P0CJ90 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PRTN3P24158 256 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 FASP25445 335 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DCTDP32321 178 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 FGF12P61328 243 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 C12orf73Q69YU5 71 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4L9Q6RFH8 374 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 LRRC29Q8WV35 223 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 HPSE2Q8WWQ2 592 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 LRTOMTQ8WZ04 291 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 OR8B4Q96RC9 309 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TBX15Q96SF7 602 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PAPOLGQ9BWT3 736 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TEX12Q9BXU0 123 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PRDM13Q9H4Q3 707 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TRIM36Q9NQ86 728 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KIF17Q9P2E2 1029 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX4Q9UBX2 424 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZNF391Q9UJN7 358 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MPC1Q9Y5U8 109 aa10.86□□□□□ -0.67
TNFRSF1A-215ENST00000543359 hCG_1807616A0A1W2PRN6 198 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DNAJC9-AS1A6NH13 148 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SRRM5B3KS81 715 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZNF879B4DU55 563 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CLDN34H7C241 214 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms