RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	MRPS12	O15235	138 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	SURF4	O15260	269 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	RAMP2	O60895	175 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	MPDU1	O75352	247 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	RBMXL2	O75526	392 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	OXT	P01178	125 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	HBE1	P02100	147 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	CD48	P09326	243 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	THRA	P10827	490 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF35	P13682	527 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	ADRB3	P13945	408 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TCP1	P17987	556 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	CD70	P32970	193 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	CDKN2B	P42772	138 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	MARCKSL1	P49006	195 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	SSR4	P51571	173 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	MRPS21	P82921	87 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	GNA12	Q03113	381 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	IL18R1	Q13478	541 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TFDP2	Q14188	446 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PAFAH1B3	Q15102	231 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	SLC9A3R2	Q15599	337 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TAL2	Q16559	108 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PARP15	Q460N3	678 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	UNC50	Q53HI1	259 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TFDP3	Q5H9I0	405 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	MEDAG	Q5VYS4	303 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TMEM215	Q68D42	235 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	SUMO4	Q6EEV6	95 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	DRAM2	Q6UX65	266 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	FRRS1	Q6ZNA5	592 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	C9orf139	Q6ZV77	190 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PEX26	Q7Z412	305 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	CCDC71	Q8IV32	467 aa	Predicted RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	ODF3L1	Q8IXM7	274 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	STPG2	Q8N412	459 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF561	Q8N587	486 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	DCAF4L2	Q8NA75	395 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	IL17D	Q8TAD2	202 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	SPPL2A	Q8TCT8	520 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	CXorf40A	Q8TE69	158 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	APOBEC4	Q8WW27	367 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	NSL1	Q96IY1	281 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF597	Q96LX8	424 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PPP1R2P1	Q96PQ5	205 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	RNF157	Q96PX1	679 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	HBEGF	Q99075	208 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PSMB7	Q99436	277 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	CABLES2	Q9BTV7	478 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TRABD	Q9H4I3	376 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	ZCCHC4	Q9H5U6	513 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PLAC1	Q9HBJ0	212 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	FBXO8	Q9NRD0	319 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TEX10	Q9NXF1	929 aa	Predicted RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	OPN4	Q9UHM6	478 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PYCARD	Q9ULZ3	195 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	NDRG2	Q9UN36	371 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	OR51B4	Q9Y5P0	310 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	RIF1	Q5UIP0	2472 aa	Known RBP	4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	LRRK1	Q38SD2	2015 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513		A0A0D9SEW6	157 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513		A0A1B0GU03	582 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	ANKRD20A5P	A0PJZ0	165 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	ASPDH	A6ND91	283 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	VSTM2B	A6NLU5	285 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	USP27X	A6NNY8	438 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	SULT1C2	O00338	296 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	PLPP1	O14494	284 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	PRKY	O43930	277 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	MFSD11	O43934	449 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	PPBP	P02775	128 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	HCK	P08631	526 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	HLA-DOB	P13765	273 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	NQO1	P15559	274 aa	Known RBP	4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	HIST1H1C	P16403	213 aa	Known RBP	4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	IGFBP5	P24593	272 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	ACVRL1	P37023	503 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	RBM34	P42696	430 aa	Known RBP	4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	SRP9	P49458	86 aa	Known RBP	4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	MEOX2	P50222	304 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	RAB13	P51153	203 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	PRKX	P51817	358 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	TAS2R39	P59534	338 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	RND3	P61587	244 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	RBX1	P62877	108 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	ABRAXAS2	Q15018	415 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	ARL6IP1	Q15041	203 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	OXA1L	Q15070	435 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	POU2AF1	Q16633	256 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	MLANA	Q16655	118 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF658B	Q4V348	819 aa	Predicted RBP	4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	GCSAML	Q5JQS6	135 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	FAM120AOS	Q5T036	256 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	PXDC1	Q5TGL8	231 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	WDR25	Q64LD2	544 aa	Predicted RBP	4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	KCTD16	Q68DU8	428 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	NCBP2-AS2	Q69YL0	99 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	RPL13AP3	Q6NVV1	102 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	NIPAL1	Q6NVV3	410 aa		4.61	□□□□□ -1.67
DDB1-219	ENST00000541513	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.61	□□□□□ -1.67

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