RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OGG1O15527 345 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 TPD52L2O43399 206 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 GATBO75879 557 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 CD2P06729 351 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 PSMB10P40306 273 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 CHN2P52757 468 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 IRF3Q14653 427 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 CDK5R1Q15078 307 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 OR8G1Q15617 311 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 MS4A15Q8N5U1 240 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 GATAD2BQ8WXI9 593 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 SAP30LQ9HAJ7 183 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 VCX3AQ9NNX9 186 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 MYEF2Q9P2K5 600 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 CLEC2DQ9UHP7 191 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 V9GYS6 101 aa14.93□□□□□ -0.02
CLSTN3-210ENST00000540931 OR4C45A6NMZ5 311 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 PLPP2O43688 288 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 NAT2P11245 290 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 PSMA1P25786 263 aaKnown RBP14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 CDKN1AP38936 164 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 TNFAIP6P98066 277 aaPredicted RBP14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 MED22Q15528 200 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 TRAM1Q15629 374 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 YIF1BQ5BJH7 314 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 CLVS2Q5SYC1 327 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 OR2G6Q5TZ20 316 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 OR5AS1Q8N127 324 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 PRSS35Q8N3Z0 413 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF485Q8NCK3 441 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 OR2Z1Q8NG97 314 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 OR8S1Q8NH09 359 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 RPS4Y2Q8TD47 263 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 GPR148Q8TDV2 347 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 RDH5Q92781 318 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 FAM71F1Q96KD3 344 aaPredicted RBP14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 NR1H4Q96RI1 486 aaPredicted RBP14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 MICU1Q9BPX6 476 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 RHNO1Q9BSD3 238 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 PAPOLGQ9BWT3 736 aaKnown RBP14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 ERVK-18Q9QC07 812 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 PIGLQ9Y2B2 252 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF281Q9Y2X9 895 aa14.92□□□□□ -0.02
CLSTN3-210ENST00000540931 LOC107986453A0A1B0GWG9 222 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 TMEM210A6NLX4 147 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 P2RY10O00398 339 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 SPRY3O43610 288 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 IGHV1-46P01743 117 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 MAPK3P27361 379 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 CD200P41217 278 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF367Q7RTV3 350 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 BHLHE23Q8NDY6 225 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 UBASH3BQ8TF42 649 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 NRGNQ92686 78 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 HPS1Q92902 700 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 CPNE2Q96FN4 548 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 POM121Q96HA1 1249 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 LYZL4Q96KX0 146 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 ADAT1Q9BUB4 502 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 RTL8AQ9BWD3 113 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 CXXC4Q9H2H0 198 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 MSL2Q9HCI7 577 aa14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 PAK1IP1Q9NWT1 392 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 HRNRQ86YZ3 2850 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-210ENST00000540931 ARFGEF3Q5TH69 2177 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 A0A1B0GTI1 187 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 ZSCAN5BA6NJL1 495 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 OR5B21A6NL26 309 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 LRRC30A6NM36 301 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 ZFPL1O95159 310 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 MT-ND2P03891 347 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF20P17024 532 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 CRYBB2P43320 205 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 KIR3DL2P43630 455 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 GATA4P43694 442 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 PDLIM4P50479 330 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 TMEM33P57088 247 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 NANOS3P60323 173 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 MLLT11Q13015 90 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 HFEQ30201 348 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 DMKNQ6E0U4 476 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF773Q6PK81 442 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 CLEC2AQ6UVW9 174 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 PEG10Q86TG7 708 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 ZDHHC23Q8IYP9 409 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 C1orf87Q8N0U7 546 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 OR5A2Q8NGI9 324 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 OR5D14Q8NGL3 314 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 OR14K1Q8NGZ2 314 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 UFD1Q92890 307 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 SORCS2Q96PQ0 1159 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 SLC7A11Q9UPY5 501 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 DHDHQ9UQ10 334 aa14.9□□□□□ -0.02
CLSTN3-210ENST00000540931 A0A087WXM4 84 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 TRIM64A6NGJ6 449 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 ALX3O95076 343 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 NRASP01111 189 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 DAOP14920 347 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 CA6P23280 308 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 CCL8P80075 99 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms