RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 IMPA1P29218 277 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 TFPI2P48307 235 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 KHKP50053 298 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CLDN2P57739 230 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CDK3Q00526 305 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM189A2Q15884 450 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 BATFQ16520 125 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 C2orf76Q3KRA6 126 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 HIKESHIQ53FT3 197 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PLEKHS1Q5SXH7 462 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF321PQ8N8H1 164 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PFN4Q8NHR9 129 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 COL26A1Q96A83 441 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 ANKRD9Q96BM1 317 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 ICAM5Q9UMF0 924 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 POLR3KQ9Y2Y1 108 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 KCNE3Q9Y6H6 103 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 LRRK1Q38SD2 2015 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 IGHV1OR15-9A0A0B4J2B8 117 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 A0A1B0GV50 99 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 TLCD2A6NGC4 264 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 OR4C45A6NMZ5 311 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 H0Y8X5 98 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 K7EP13 123 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 MASP2O00187 686 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 JTBO76095 146 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 STK17BO94768 372 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 RCBTB2O95199 551 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 GAPDHP04406 335 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC35G6P0C7Q6 338 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 GIMD1P0DJR0 217 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 KLK2P20151 261 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 S100A7P31151 101 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 PTGER1P34995 402 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 POLR2HP52434 150 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 SELENOTP62341 195 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 TSTA3Q13630 321 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF627Q7L945 461 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 SMIM15Q7Z3B0 74 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 C1orf87Q8N0U7 546 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 DEFB119Q8N690 84 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 OR9A1PQ8NGU1 263 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 COX14Q96I36 57 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 SMIM3Q9BZL3 60 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 PCED1AQ9H1Q7 454 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 LRFN1Q9P244 771 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 FBXL17Q9UF56 701 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 KLK13Q9UKR3 277 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 RAB22AQ9UL26 194 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 SRPK3Q9UPE1 567 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 C20orf202A1L168 122 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 TMEM202A6NGA9 273 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 K7ESF4 209 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 HSD17B6O14756 317 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 CCL25O15444 150 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF217O75362 1048 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 IGHV4-34P06331 123 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 MDKP21741 143 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 LMO1P25800 156 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 FRKP42685 505 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 ARRB1P49407 418 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 RAP1BP61224 184 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC35A1P78382 337 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 ADAMTSL4Q6UY14 1074 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 OR5AK2Q8NH90 309 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 MRGPRDQ8TDS7 321 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 RNF166Q96A37 237 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 Q96M85 177 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 OR2J1Q9GZK6 312 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 ZMAT3Q9HA38 289 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 MSL2Q9HCI7 577 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 RPH3ALQ9UNE2 315 aa8.43□□□□□ -1.06
CTNNA1-243ENST00000540387 TRBV11-1A0A0K0K1C0 115 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 CBY3A6NI87 242 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LATO43561 262 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 FCMRO60667 390 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 C1QL1O75973 258 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 PPP1CCP36873 323 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 TNFSF10P50591 281 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 RAB7AP51149 207 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC25A1P53007 311 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 CEBPGP53567 150 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 S100A10P60903 97 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 H3F3AP84243 136 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 DMWDQ09019 674 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LASP1Q14847 261 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ARHGAP19Q14CB8 494 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 GXYLT1Q4G148 440 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 NUFIP2Q7Z417 695 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF547Q8IVP9 402 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LILRA3Q8N6C8 439 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LMNTD1Q8N9Z9 388 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF740Q8NDX6 193 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 OR4X1Q8NH49 305 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM3DQ96BQ1 224 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 BMFQ96LC9 184 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF2Q9BSG1 426 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms