RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 ZNF181Q2M3W8 571 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 ZNF771Q7L3S4 317 aaPredicted RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 C8orf59Q8N0T1 100 aaPredicted RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 SEMA6DQ8NFY4 1073 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 ZNF420Q8TAQ5 688 aaPredicted RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 FAM71F1Q96KD3 344 aaPredicted RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 PAPOLGQ9BWT3 736 aaKnown RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 NARFLQ9H6Q4 476 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 PPP1R3EQ9H7J1 279 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 FGF20Q9NP95 211 aaPredicted RBP11.32□□□□□ -0.6
PRPF19-204ENST00000539960 INPP5EQ9NRR6 644 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 C14orf119Q9NWQ9 140 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 TLN2Q9Y4G6 2542 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 ABCA1O95477 2261 aa11.32□□□□□ -0.6
PRPF19-204ENST00000539960 NIPBLQ6KC79 2804 aaeCLIP11.31□□□□□ -0.6
PRPF19-204ENST00000539960 LRRC30A6NM36 301 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 J3QLW9 94 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 GRPP07492 148 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ZNF19P17023 458 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 PSMB10P40306 273 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ACTA2P62736 377 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ACTG2P63267 376 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 RIPPLY1Q0D2K3 151 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 PRAMEF6Q5VXH4 476 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 FDX2Q6P4F2 183 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 Q6ZSR3 168 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 LRRC28Q86X40 367 aaPredicted RBP11.31□□□□□ -0.6
PRPF19-204ENST00000539960 COMMD2Q86X83 199 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 PRSS35Q8N3Z0 413 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 OR8S1Q8NH09 359 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 Q8TCH9 128 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 PIGCQ92535 297 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 DVL3Q92997 716 aaPredicted RBP11.31□□□□□ -0.6
PRPF19-204ENST00000539960 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
PRPF19-204ENST00000539960 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ZNF649Q9BS31 505 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 FN3KRPQ9HA64 309 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ABCB9Q9NP78 766 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 YAE1D1Q9NRH1 226 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 UFSP2Q9NUQ7 469 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ERVK13-1Q9NX77 482 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 CR1P17927 2039 aa11.31□□□□□ -0.6
PRPF19-204ENST00000539960 ZNF816-ZNF321PA0A0X1KG74 233 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 ANXA2P2A6NMY6 339 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 ZNF850A8MQ14 1090 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 P2RY10O00398 339 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 DHRS3O75911 302 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 CYB5R3P00387 301 aaPredicted RBP11.3□□□□□ -0.6
PRPF19-204ENST00000539960 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 DCKP27707 260 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 AQP4P55087 323 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 PRDX4Q13162 271 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 ZMYND11Q15326 602 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 ZBTB37Q5TC79 503 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 DOK3Q7L591 496 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 THAP5Q7Z6K1 395 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 SYS1Q8N2H4 156 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 OR11L1Q8NGX0 322 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 OR2G2Q8NGZ5 317 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 FBLIM1Q8WUP2 373 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 OR5P3Q8WZ94 311 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 ITPKCQ96DU7 683 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 PELI1Q96FA3 418 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 C4orf36Q96KX1 117 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 HIST1H2AAQ96QV6 131 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 MICU1Q9BPX6 476 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 JAM3Q9BX67 310 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 V9GYS6 101 aa11.3□□□□□ -0.6
PRPF19-204ENST00000539960 SETD2Q9BYW2 2564 aaPredicted RBP11.29□□□□□ -0.6
PRPF19-204ENST00000539960 DYSFO75923 2080 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 ISPDA4D126 451 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 FSTL3O95633 263 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 ATP6V1G2O95670 118 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 TGFAP01135 160 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 IRF2P14316 349 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 CCL1P22362 96 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 KIR3DL2P43630 455 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 CCR9P51686 369 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 CDH15P55291 814 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 BTG1P62324 171 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 ODF4Q2M2E3 257 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 CEACAM21Q3KPI0 293 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 TMEM155Q4W5P6 130 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 FAM76BQ5HYJ3 339 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 WDR38Q5JTN6 314 aa11.29□□□□□ -0.6
PRPF19-204ENST00000539960 LAIR2Q6ISS4 152 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms